RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PCSK6P29122 969 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 NTSR1P30989 418 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 HOXA13P31271 388 aaPredicted RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 AKT2P31751 481 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 GKP32189 559 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 MAP2K2P36507 400 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 POU3F4P49335 361 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 GTF2A1P52655 376 aaPredicted RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 DGKQP52824 942 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PNLIPRP2P54317 469 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PTENP60484 403 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SUMO2P61956 95 aaKnown RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 ACOX1Q15067 660 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 CHRNA6Q15825 494 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 BCL2A1Q16548 175 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 CERKLQ49MI3 558 aaPredicted RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 LDLRAP1Q5SW96 308 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 GCNT6Q5T4J0 391 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 HECTD2Q5U5R9 776 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 FAM91A1Q658Y4 838 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 KCTD11Q693B1 232 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ATL3Q6DD88 541 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 KIAA1161Q6NSJ0 714 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ANKRD16Q6P6B7 361 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 TTC23LQ6PF05 361 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 KIAA1324Q6UXG2 1013 aaKnown RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 RANBP10Q6VN20 620 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PEG10Q86TG7 708 aaKnown RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 BIVMQ86UB2 503 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 RASAL3Q86YV0 1011 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 FAM219AQ8IW50 185 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 C12orf56Q8IXR9 622 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SYCE1Q8N0S2 351 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 BATF2Q8N1L9 274 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SIRT6Q8N6T7 355 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ANKFN1Q8N957 763 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 FSIP1Q8NA03 581 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 CLEC1AQ8NC01 280 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SETD9Q8NE22 299 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SPATA4Q8NEY3 305 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SLC24A4Q8NFF2 622 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 BBS1Q8NFJ9 593 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PDLIM2Q96JY6 352 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ANKRD27Q96NW4 1050 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ALS2CR12Q96Q35 445 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 HAPLN3Q96S86 360 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 COQ7Q99807 217 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 KATNB1Q9BVA0 655 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SCNM1Q9BWG6 230 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 NUSAP1Q9BXS6 441 aaKnown RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 S1PR5Q9H228 398 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 HIPK3Q9H422 1215 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 AZI2Q9H6S1 392 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 RRP7BPQ9NSQ0 103 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 SETD4Q9NVD3 440 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ETNK2Q9NVF9 386 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 FAM120CQ9NX05 1096 aaKnown RBP4.06□□□□□ -1.76
VPS41-212ENST00000482217 ALKBH4Q9NXW9 302 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 HCN3Q9P1Z3 774 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ATPIF1Q9UII2 106 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 CDH22Q9UJ99 828 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PLAGL1Q9UM63 463 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 CBY1Q9Y3M2 126 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 TIMM22Q9Y584 194 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PCDHB7Q9Y5E2 793 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 ATP6V1DQ9Y5K8 247 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 PEG3Q9GZU2 1588 aa4.06□□□□□ -1.76
VPS41-212ENST00000482217 A0A087WV48 116 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 EDDM13A0A1B0GTR0 161 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 A0A1W2PR77 199 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 C17orf102A2RUQ5 167 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ANKRD61A6NGH8 418 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 OR6C75A6NL08 312 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 MEI4A8MW99 385 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SPECC1L-ADORA2AF8WAN1 911 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 WRBO00258 174 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PRRG1O14668 218 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PER2O15055 1255 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 OGTO15294 1046 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CHADO15335 359 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 LRRTM2O43300 516 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SELENOFO60613 162 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 B4GALT2O60909 372 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CBFA2T3O75081 653 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 AVILO75366 819 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ERLIN2O94905 339 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 TTLL1O95922 423 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CSF2P04141 144 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CRYGCP07315 174 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CLTAP09496 248 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 TMEM225BP0DP42 221 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ANPEPP15144 967 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 NDUFB7P17568 137 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CD72P21854 359 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 RYKP34925 604 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SOAT1P35610 550 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ATP5C1P36542 298 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 CPOXP36551 454 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 GPD2P43304 727 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms