RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	TSSK1B	Q9BXA7	367 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	TWSG1	Q9GZX9	223 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	SMARCAL1	Q9NZC9	954 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	SERTAD3	Q9UJW9	196 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	ZNF148	Q9UQR1	794 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	MRPS18B	Q9Y676	258 aa	Known RBP	10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	KCNMB2	Q9Y691	235 aa		10.16	□□□□□ -0.78
GGA1-219	ENST00000481613	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	ABCA12	Q86UK0	2595 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	GSAP	A4D1B5	854 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	LIAS	O43766	372 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	TIAF1	O95411	115 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	IFNB1	P01574	187 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	HBQ1	P09105	142 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	RAB40AL	P0C0E4	278 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	POU3F2	P20265	443 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	ADRA1D	P25100	572 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	CDKN1C	P49918	316 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	BOP1	Q14137	746 aa	Known RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	OASL	Q15646	514 aa	Known RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	DBN1	Q16643	649 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	LACTB2	Q53H82	288 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	IZUMO3	Q5VZ72	239 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	TCTN3	Q6NUS6	607 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	PPP1R21	Q6ZMI0	780 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	APLF	Q8IW19	511 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	PIANP	Q8IYJ0	282 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	TBC1D21	Q8IYX1	336 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	CLDN19	Q8N6F1	224 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	CCDC89	Q8N998	374 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	SPC24	Q8NBT2	197 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	OR52E1	Q8NGJ3	308 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	MAIP1	Q8WWC4	291 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	DPH2	Q9BQC3	489 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	PITPNM3	Q9BZ71	974 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	CHRNA10	Q9GZZ6	450 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	ETNK1	Q9HBU6	452 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	IGSF5	Q9NSI5	407 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	PAK5	Q9P286	719 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	ANAPC5	Q9UJX4	755 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	GUCA1B	Q9UMX6	200 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	FARSA	Q9Y285	508 aa	Known RBP	10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	CAPN6	Q9Y6Q1	641 aa		10.15	□□□□□ -0.78
GGA1-219	ENST00000481613	MED13	Q9UHV7	2174 aa		10.15	□□□□□ -0.79
GGA1-219	ENST00000481613	CSMD1	Q96PZ7	3565 aa		10.15	□□□□□ -0.79
GGA1-219	ENST00000481613	TCRBV7S2A1N4T	A0A589	114 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	CDC14C	A4D256	554 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	SLC9B1P1	A6NJY1	282 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	MEN1	O00255	615 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	CCL22	O00626	93 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	RFPL1	O75677	317 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	RPN2	P04844	631 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	CD63	P08962	238 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	NR1D1	P20393	614 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	CYP2A7	P20853	494 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	PDHA2	P29803	388 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	FOXN2	P32314	431 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	SHMT2	P34897	504 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	UQCRFS1	P47985	274 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	PREP	P48147	710 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	PMS2	P54278	862 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	MLLT10	P55197	1068 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	SEMA5A	Q13591	1074 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	RPS6KA1	Q15418	735 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	GPR19	Q15760	415 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	UGT8	Q16880	541 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	SYTL3	Q4VX76	610 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	FASTKD1	Q53R41	847 aa	Known RBP	10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	AARS2	Q5JTZ9	985 aa	Known RBP	10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	TSTD2	Q5T7W7	516 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	AFTPH	Q6ULP2	937 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	ZNF662	Q6ZS27	426 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	OR52K1	Q8NGK4	314 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	OR4L1	Q8NH43	312 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	NAT14	Q8WUY8	206 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	ELMO1	Q92556	727 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	MR1	Q95460	341 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	HDAC10	Q969S8	669 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	C17orf62	Q9BQA9	187 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	SLC7A5P2	Q9GIP4	190 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	ACTL8	Q9H568	366 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	RAB6B	Q9NRW1	208 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	OR6C2	Q9NZP2	312 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	ASF1A	Q9Y294	204 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	DRG1	Q9Y295	367 aa	Known RBP	10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	ZKSCAN5	Q9Y2L8	839 aa		10.14	□□□□□ -0.79
GGA1-219	ENST00000481613	FBN2	P35556	2912 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	SLC5A10	A0PJK1	596 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	CCDC162P	A2VCL2	907 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613		E7EQ34	232 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	BTN3A3	O00478	584 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	BTN3A1	O00481	513 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	ACADL	P28330	430 aa		10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	ARCN1	P48444	511 aa	Known RBP	10.13	□□□□□ -0.79
GGA1-219	ENST00000481613	ITGA1	P56199	1179 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms