RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 IP6K3Q96PC2 410 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 DHRS4Q9BTZ2 278 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 SEMA4CQ9C0C4 833 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 FAM96AQ9H5X1 160 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 CASS4Q9NQ75 786 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 CATSPERZQ9NTU4 200 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 INTS7Q9NVH2 962 aaKnown RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 GNPTGQ9UJJ9 305 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 AP1M2Q9Y6Q5 423 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 MGAQ8IWI9 3026 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 GOLGA6L10A0A0M3HER8 536 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 CCDC162PA2VCL2 907 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 C9J4A7 227 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 E7EQ34 232 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PRMT5O14744 637 aaPredicted RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 KATNA1O75449 491 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 CREG1O75629 220 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 RFPL1O75677 317 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 IGHEP01854 428 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 FGGP02679 453 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PRKAR1AP10644 381 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 FOLR1P15328 257 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 ITGB6P18564 788 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 POLR2CP19387 275 aaPredicted RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 TPSB2P20231 275 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 AGXTP21549 392 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PTPN4P29074 926 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PRDX3P30048 256 aaKnown RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 CSRP3P50461 194 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 KPNA2P52292 529 aaKnown RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 PMS2P54278 862 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 ITGA1P56199 1179 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 CYP4F2P78329 520 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 TPSAB1Q15661 275 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 SPESP1Q6UW49 350 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 SDCCAG8Q86SQ7 713 aaPredicted RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 DCUN1D3Q8IWE4 304 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 PIANPQ8IYJ0 282 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 CLDN19Q8N6F1 224 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 C1orf54Q8WWF1 131 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 HDAC10Q969S8 669 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 ZNF501Q96CX3 271 aaPredicted RBP11.11□□□□□ -0.63
CCM2-213ENST00000480658 CLIP3Q96DZ5 547 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 ELMO2Q96JJ3 720 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 CARD6Q9BX69 1037 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 TWSG1Q9GZX9 223 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 SRPK3Q9UPE1 567 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 MAN2B2Q9Y2E5 1009 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 JRKLQ9Y4A0 524 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 AHCTF1Q8WYP5 2266 aa11.11□□□□□ -0.63
CCM2-213ENST00000480658 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 TCRBV7S2A1N4TA0A589 114 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 MAGEB16A2A368 324 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 BTN3A1O00481 513 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 CCL22O00626 93 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 NKX2-8O15522 239 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 SUV39H1O43463 412 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 GOT2P00505 430 aaKnown RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 CA5AP35218 305 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 CCNFP41002 786 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 RAB28P51157 221 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 RRADP55042 308 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 ADARP55265 1226 aaKnown RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 PPP1CAP62136 330 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 KCNC4Q03721 635 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 UGT8Q16880 541 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 SLC5A12Q1EHB4 618 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 CCDC38Q502W7 563 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 LACTB2Q53H82 288 aaPredicted RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 PTRHD1Q6GMV3 140 aaKnown RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 TCTN3Q6NUS6 607 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 C16orf46Q6P387 395 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 TLDC1Q6P9B6 456 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 ZNF517Q6ZMY9 492 aaPredicted RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 APLFQ8IW19 511 aaPredicted RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 SLC22A15Q8IZD6 547 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 UNC5BQ8IZJ1 945 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 PROKR1Q8TCW9 393 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 GRK7Q8WTQ7 553 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 TCF12Q99081 682 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 NLNQ9BYT8 704 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 ACTL8Q9H568 366 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 CLMPQ9H6B4 373 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 ACTR5Q9H9F9 607 aaPredicted RBP11.1□□□□□ -0.63
CCM2-213ENST00000480658 ACTR10Q9NZ32 417 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 SAMD15Q9P1V8 674 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 SNX7Q9UNH6 387 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 PCDHGB7Q9Y5F8 929 aa11.1□□□□□ -0.63
CCM2-213ENST00000480658 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.09□□□□□ -0.63
CCM2-213ENST00000480658 A0A0J9YY10 115 aa11.09□□□□□ -0.63
CCM2-213ENST00000480658 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
CCM2-213ENST00000480658 SLC9B1P1A6NJY1 282 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms