RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MLXQ9UH92 298 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 ERVK-11Q9UQG0 969 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 PCDHGB6Q9Y5F9 930 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 TMEM150BA6NC51 233 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 PRAMEF1O95521 474 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 NSG1P42857 185 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 SPIN4Q56A73 249 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 LNX1Q8TBB1 728 aaPredicted RBP9.4□□□□□ -0.9
VEGFA-212ENST00000480614 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 KLHL5Q96PQ7 755 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 SLIT3O75094 1523 aa9.4□□□□□ -0.9
VEGFA-212ENST00000480614 EDF1O60869 148 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 PDCD4Q53EL6 469 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 AMIGO2Q86SJ2 522 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 HTRA1Q92743 480 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 RIPOR3Q96MK2 946 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 TSSK3Q96PN8 268 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 YTHDF1Q9BYJ9 559 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 IPPKQ9H8X2 491 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 MCCC2Q9HCC0 563 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 KCNIP3Q9Y2W7 256 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 SPIN1Q9Y657 262 aaPredicted RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 A0A0J9YVX5 310 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 MEIS2O14770 477 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 C2P06681 752 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CD52P31358 61 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CDH12P55289 794 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 DUSP28Q4G0W2 176 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 LACTB2Q53H82 288 aaPredicted RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CLNKQ7Z7G1 428 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 GALNT5Q7Z7M9 940 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CFAP206Q8IYR0 622 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 POU5F1Q01860 360 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.911e-7■■□□□ 12.8
VEGFA-212ENST00000480614 GK5Q6ZS86 529 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CHST9Q7L1S5 443 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 CAND1Q86VP6 1230 aaKnown RBP9.4□□□□□ -0.91
VEGFA-212ENST00000480614 AKT1S1Q96B36 256 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 ATPIF1Q9UII2 106 aa9.4□□□□□ -0.91
VEGFA-212ENST00000480614 ELOA3DA6NLF2 546 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 OR2AT4A6NND4 320 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF726A6NNF4 738 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 INSIG1O15503 277 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 OR7A10O76100 309 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 HERC3Q15034 1050 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ELOA3BQ3SY89 546 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PRAMEF17Q5VTA0 474 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ELOA3Q8NG57 546 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 GPR21Q99679 349 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ALPPP05187 535 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PET100P0DJ07 73 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 TAF1AQ15573 450 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 DGLUCYQ7Z3D6 616 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 LIX1Q8N485 282 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 KLHL36Q8N4N3 616 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 GEMIN6Q8WXD5 167 aaKnown RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 GAL3ST4Q96RP7 486 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 POLR2J3Q9H1A7 115 aaKnown RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 DUS2Q9NX74 493 aaKnown RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 E7ENX8 843 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 GRSF1Q12849 480 aaKnown RBP eCLIP9.39□□□□□ -0.917e-8■□□□□ 8.8
VEGFA-212ENST00000480614 CAPSQ13938 189 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SNAP47Q5SQN1 464 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 MAB21L3Q8N8X9 362 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 COQ8BQ96D53 544 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 HIPK3Q9H422 1215 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 C1orf109Q9NX04 203 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 DUXAA6NLW8 204 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 EPCAMP16422 314 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 CEBPGP53567 150 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SP2Q02086 613 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 CRY2Q49AN0 593 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 FAM124AQ86V42 546 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 IFNL1Q8IU54 200 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SUN5Q8TC36 379 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PPP1R13LQ8WUF5 828 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 LPPQ93052 612 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 HSD17B14Q9BPX1 270 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 A0A1W2PQH9 124 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PPEF2O14830 753 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 KIF26BQ2KJY2 2108 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PSRC1Q6PGN9 363 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 NAT14Q8WUY8 206 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 JSRP1Q96MG2 331 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 POLMQ9NP87 494 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-212ENST00000480614 PI4KAP42356 2102 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 DUOX1Q9NRD9 1551 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 IL10RBQ08334 325 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SEMA5AQ13591 1074 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 SPATA6LQ8N4H0 392 aa9.39□□□□□ -0.91
VEGFA-212ENST00000480614 ATP6V1C2Q8NEY4 427 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms