RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 RAB40ALP0C0E4 278 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 VAV2P52735 878 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 GDF10P55107 478 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 CACNG1Q06432 222 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 RPA4Q13156 261 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 ZNF449Q6P9G9 518 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 FAM198BQ6UWH4 519 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 CDHR3Q6ZTQ4 885 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 TRIM73Q86UV7 250 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 SYTL1Q8IYJ3 562 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 ADGRF3Q8IZF5 1079 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 FAM26EQ8N5C1 309 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 NLNQ9BYT8 704 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 SYTL2Q9HCH5 934 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 SERTAD3Q9UJW9 196 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 AMFRQ9UKV5 643 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 TCFL5Q9UL49 500 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 ICKQ9UPZ9 632 aa18.25■□□□□ 0.51
ABCF3-214ENST00000480562 R3HDM2Q9Y2K5 976 aaKnown RBP18.25■□□□□ 0.51
ABCF3-214ENST00000480562 USP9XQ93008 2570 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-214ENST00000480562 GOLGA6L9A6NEM1 432 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 OR51F1A6NGY5 319 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 C2orf74A8MZ97 194 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 MAP3K7O43318 606 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 BRD3Q15059 726 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 NAPRTQ6XQN6 538 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 PEX26Q7Z412 305 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 KIAA1328Q86T90 577 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 OR5AR1Q8NGP9 310 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 STYXQ8WUJ0 223 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 SLC7A5P2Q9GIP4 190 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 MLXIPLQ9NP71 852 aa18.24■□□□□ 0.51
ABCF3-214ENST00000480562 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
ABCF3-214ENST00000480562 USP9YO00507 2555 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-214ENST00000480562 PIKFYVEQ9Y2I7 2098 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 A0A0U1RQJ8 604 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 TCRBV7S2A1N4TA0A589 114 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 E7EQ34 232 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 ZNF749O43361 778 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 ZNF189O75820 626 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-214ENST00000480562 TMEM63AO94886 807 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 AP2A2O94973 939 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 AP2A1O95782 977 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 FTCDO95954 541 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 MSL3P1P0C860 447 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 UQCRFS1P47985 274 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 ITGA1P56199 1179 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 CCDC38Q502W7 563 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 SPESP1Q6UW49 350 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 UBL4BQ8N7F7 174 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 MRFAP1L1Q96HT8 127 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 TMEM121Q9BTD3 319 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 FAM60AQ9NP50 221 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 SEC16AO15027 2179 aa18.23■□□□□ 0.51
ABCF3-214ENST00000480562 MROH6A6NGR9 719 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 A6NL46 340 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 ZNF185O15231 689 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 ATXN8OSP0DMR3 200 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
ABCF3-214ENST00000480562 NSG1P42857 185 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 KLF1Q13351 362 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-214ENST00000480562 NCF4Q15080 339 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 DEFB110Q30KQ9 67 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 P3H1Q32P28 736 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 PAPD7Q5XG87 772 aaKnown RBP18.22■□□□□ 0.51
ABCF3-214ENST00000480562 UNC5AQ6ZN44 842 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 HOOK3Q86VS8 718 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 ZBTB2Q8N680 514 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 EFCAB3Q8N7B9 438 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 SLC35B2Q8TB61 432 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 CPT1CQ8TCG5 803 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 ELMO1Q92556 727 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 SPHK1Q9NYA1 384 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 ASF1AQ9Y294 204 aa18.22■□□□□ 0.51
ABCF3-214ENST00000480562 UTP20O75691 2785 aaKnown RBP18.22■□□□□ 0.51
ABCF3-214ENST00000480562 RP1L1Q8IWN7 2480 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-214ENST00000480562 CCDC162PA2VCL2 907 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 LIN7AO14910 233 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-214ENST00000480562 PSMD3O43242 534 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 HCRTR1O43613 425 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 VPS4BO75351 444 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 CEACAM4O75871 244 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 GSTM1P09488 218 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 TPBGLP0DKB5 382 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 UGT2B7P16662 529 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 GNLYP22749 145 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 ACADLP28330 430 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 FOXN2P32314 431 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 GSTM4Q03013 218 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 ZIC1Q15915 447 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 C19orf47Q8N9M1 422 aaKnown RBP18.21■□□□□ 0.51
ABCF3-214ENST00000480562 FDCSPQ8NFU4 85 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 OR52K1Q8NGK4 314 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 NUDT9Q9BW91 350 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 SPRTNQ9H040 489 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-214ENST00000480562 RBSNQ9H1K0 784 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 LUZP4Q9P127 313 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 PLAGL1Q9UM63 463 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms