RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 TRIM56Q9BRZ2 755 aaKnown RBP16.73■□□□□ 0.27
HMGN1-212ENST00000479586 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 SLC25A51Q9H1U9 297 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 SLC22A11Q9NSA0 550 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 UBP1Q9NZI7 540 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 IL17CQ9P0M4 197 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
HMGN1-212ENST00000479586 ANKHD1Q8IWZ3 2542 aaKnown RBP16.73■□□□□ 0.27
HMGN1-212ENST00000479586 SOCS6O14544 535 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 ZSCAN9O15535 394 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-212ENST00000479586 MSH3P20585 1137 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 MMP11P24347 488 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 SSTR2P30874 369 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 GABRA4P48169 554 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 AP1B1Q10567 949 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 HADHQ16836 314 aaKnown RBP16.72■□□□□ 0.27
HMGN1-212ENST00000479586 GFRALQ6UXV0 394 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 C19orf47Q8N9M1 422 aaKnown RBP16.72■□□□□ 0.27
HMGN1-212ENST00000479586 OR1N1Q8NGS0 311 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 NR4A3Q92570 626 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 FERD3LQ96RJ6 166 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 LHPPQ9H008 270 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 XKR8Q9H6D3 395 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 TXLNGQ9NUQ3 528 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 ACTR10Q9NZ32 417 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 SH3BGRL2Q9UJC5 107 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 HEBP2Q9Y5Z4 205 aa16.72■□□□□ 0.27
HMGN1-212ENST00000479586 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 C2orf74A8MZ97 194 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 C19orf84I3L1E1 186 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 SKILP12757 684 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 PRKCIP41743 596 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 TMPRSS15P98073 1019 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 KLHL30Q0D2K2 578 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 ITGA9Q13797 1035 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 PDK2Q15119 407 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 SLC14A2Q15849 920 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 ZDHHC20Q5W0Z9 365 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 SPESP1Q6UW49 350 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 RPTNQ6XPR3 784 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 CFAP206Q8IYR0 622 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 ADGRF3Q8IZF5 1079 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 OR52E1Q8NGJ3 308 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 SMOXQ9NWM0 555 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 HS3ST3B1Q9Y662 390 aa16.71■□□□□ 0.27
HMGN1-212ENST00000479586 KCNN4O15554 427 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 SGTAO43765 313 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 KLHL18O94889 574 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 CHRNA4P43681 627 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 SRSF11Q05519 484 aaKnown RBP16.7■□□□□ 0.26
HMGN1-212ENST00000479586 Q0VFX4 171 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 MFAP5Q13361 173 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 BCL7AQ4VC05 210 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 KIRREL2Q6UWL6 708 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 AMIGO1Q86WK6 493 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 PLD5Q8N7P1 536 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 PHC3Q8NDX5 983 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 NACC2Q96BF6 587 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 RBM41Q96IZ5 413 aaKnown RBP16.7■□□□□ 0.26
HMGN1-212ENST00000479586 THOC3Q96J01 351 aaKnown RBP16.7■□□□□ 0.26
HMGN1-212ENST00000479586 CCM2Q9BSQ5 444 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 TRABDQ9H4I3 376 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 GLOD4Q9HC38 313 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGN1-212ENST00000479586 AIPL1Q9NZN9 384 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 CACNA1CQ13936 2221 aa16.7■□□□□ 0.26
HMGN1-212ENST00000479586 FBN3Q75N90 2809 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 KLHL33A6NCF5 533 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 UNC5CO95185 931 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 ITGAXP20702 1163 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 CA7P43166 264 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 TAS2R40P59535 323 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 PTPRCAPQ14761 206 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 SIRPB2Q5JXA9 342 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 MTFR2Q6P444 385 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 TMEM207Q6UWW9 146 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 SHISA6Q6ZSJ9 500 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 GLT6D1Q7Z4J2 308 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 LINC00615Q96LM1 132 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-212ENST00000479586 HGH1Q9BTY7 390 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 TFB2MQ9H5Q4 396 aaKnown RBP16.69■□□□□ 0.26
HMGN1-212ENST00000479586 IRAK4Q9NWZ3 460 aa16.69■□□□□ 0.26
HMGN1-212ENST00000479586 MYO1FO00160 1098 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 PRAMEF1O95521 474 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 PYGMP11217 842 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 UGT2B7P16662 529 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 CAPN3P20807 821 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
HMGN1-212ENST00000479586 PBX1P40424 430 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 ADORA2A-AS1P86434 159 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 PRKG2Q13237 762 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 CDSNQ15517 529 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 TUBB8Q3ZCM7 444 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 SARM1Q6SZW1 724 aa16.68■□□□□ 0.26
HMGN1-212ENST00000479586 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms