RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 RTP2Q5QGT7 225 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 LETMD1Q6P1Q0 360 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 OR2T12Q8NG77 320 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 OR6Q1Q8NGQ2 317 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 MCOLN3Q8TDD5 553 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 GPR21Q99679 349 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 POLR1EQ9GZS1 481 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ACTR8Q9H981 624 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PDFQ9HBH1 243 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 CATSPERZQ9NTU4 200 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 TMEFF2Q9UIK5 374 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ITGB1BP2Q9UKP3 347 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 GJB5O95377 273 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 FTH1P02794 183 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 TACR2P21452 398 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 GSSP48637 474 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ACVR1Q04771 509 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 RFTN2Q52LD8 501 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PRSS55Q6UWB4 352 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 UTS2BQ765I0 119 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 C10orf111Q8N326 155 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PIK3C3Q8NEB9 887 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 HTRA1Q92743 480 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 WBP2Q969T9 261 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 GKN1Q9NS71 199 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 ANKMY1Q9P2S6 941 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 INTS6Q9UL03 887 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 PCDHGC4Q9Y5F7 938 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
PDZRN3-208ENST00000479530 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 MTMR11A4FU01 709 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PRMT5O14744 637 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PFDN6O15212 129 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 TSPAN3O60637 253 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 RPP40O75818 363 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 CHEK2O96017 543 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PRLP01236 227 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 IGLV3-27P01718 113 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 RPL17P18621 184 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 DCTP40126 519 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 MASP1P48740 699 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 MRPL19P49406 292 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 IL5RAQ01344 420 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PTGR1Q14914 329 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 HIST2H2ACQ16777 129 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 CYP20A1Q6UW02 462 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PRR23BQ6ZRT6 265 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF548Q8NEK5 533 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 DYNC2LI1Q8TCX1 351 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 BRSK1Q8TDC3 778 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 TRIB3Q96RU7 358 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 THUMPD3Q9BV44 507 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 POLR3HQ9Y535 204 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PCDHGA10Q9Y5H3 936 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 ZFP37Q9Y6Q3 630 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 IQCF5A8MTL0 148 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 E2F3O00716 465 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 ANKRD28O15084 1053 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 ACVR2AP27037 513 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 GTDC1Q4AE62 458 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM26DQ5JW98 314 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 GPRIN3Q6ZVF9 776 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 PSMA8Q8TAA3 256 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM193BQ96PV7 902 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 RBM4BQ9BQ04 359 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 RBM4Q9BWF3 364 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 MIR1-1HGQ9H1L0 117 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 EHD1Q9H4M9 534 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 FBXO8Q9NRD0 319 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 VNN3Q9NY84 501 aa13.06□□□□□ -0.32
PDZRN3-208ENST00000479530 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SYCE1LA8MT33 242 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 GSTA4O15217 222 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 INPPL1O15357 1258 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 GMNNO75496 209 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 KLKB1P03952 638 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ALOX5P09917 674 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 IL27RAQ6UWB1 636 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms