RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PRLHRP49683 370 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 OTUD4Q01804 1114 aaKnown RBP15.54■□□□□ 0.08
DDX56-210ENST00000479440 DEFB110Q30KQ9 67 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 BNC2Q6ZN30 1099 aaPredicted RBP15.54■□□□□ 0.08
DDX56-210ENST00000479440 SLC25A41Q8N5S1 370 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 OR52E1Q8NGJ3 308 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 ZNF398Q8TD17 642 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 CPLX3Q8WVH0 158 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 RELTQ969Z4 430 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 VPS50Q96JG6 964 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 TEKT5Q96M29 485 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 CTTNBP2NLQ9P2B4 639 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 DHCR7Q9UBM7 475 aaKnown RBP15.54■□□□□ 0.08
DDX56-210ENST00000479440 CDC23Q9UJX2 597 aa15.54■□□□□ 0.08
DDX56-210ENST00000479440 PRRC2CQ9Y520 2896 aaKnown RBP15.54■□□□□ 0.08
DDX56-210ENST00000479440 PIKFYVEQ9Y2I7 2098 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 NUP210LQ5VU65 1888 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 CFAP99D6REC4 459 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 H3BMH7 237 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 BUD23O43709 281 aaKnown RBP15.53■□□□□ 0.08
DDX56-210ENST00000479440 CNOT3O75175 753 aaKnown RBP15.53■□□□□ 0.08
DDX56-210ENST00000479440 JRKO75564 520 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 MMP11P24347 488 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 CHRNA4P43681 627 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 NFKBIBQ15653 356 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 SLC1A5Q15758 541 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 FIGNQ5HY92 759 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 RPUSD3Q6P087 351 aaKnown RBP15.53■□□□□ 0.08
DDX56-210ENST00000479440 ALKBH5Q6P6C2 394 aaKnown RBP15.53■□□□□ 0.08
DDX56-210ENST00000479440 ZNF449Q6P9G9 518 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 KDELC1Q6UW63 502 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 NPNTQ6UXI9 565 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 LILRA3Q8N6C8 439 aaPredicted RBP15.53■□□□□ 0.08
DDX56-210ENST00000479440 FKBP10Q96AY3 582 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 NDC1Q9BTX1 674 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 HGH1Q9BTY7 390 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 FSD1LQ9BXM9 530 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 CHRNA10Q9GZZ6 450 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 ASB8Q9H765 288 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 MVB12BQ9H7P6 319 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 VPS37BQ9H9H4 285 aa15.53■□□□□ 0.08
DDX56-210ENST00000479440 POLEQ07864 2286 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 A0A087X0T9 212 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 C17orf113A0A1B0GUU1 675 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 SRP72O76094 671 aaKnown RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 SERPING1P05155 500 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 FAM228BP0C875 321 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 NFKB1P19838 968 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 INAQ16352 499 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 KRTAP21-3Q3LHN1 58 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 ODF2Q5BJF6 829 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 MTFR2Q6P444 385 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 RFX6Q8HWS3 928 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 ADGRF3Q8IZF5 1079 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 ZNF655Q8N720 491 aaPredicted RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 NAT14Q8WUY8 206 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 ITLN2Q8WWU7 325 aaPredicted RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 SYN2Q92777 582 aaPredicted RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 DLG3Q92796 817 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 LHPPQ9H008 270 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 SPRTNQ9H040 489 aaPredicted RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 COG4Q9H9E3 785 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 MRM3Q9HC36 420 aaKnown RBP15.52■□□□□ 0.08
DDX56-210ENST00000479440 FAM60AQ9NP50 221 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 CRLS1Q9UJA2 301 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 ITGB1BP2Q9UKP3 347 aa15.52■□□□□ 0.08
DDX56-210ENST00000479440 A0A0J9YY10 115 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 ALOX12BO75342 701 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 SHMT2P34897 504 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 CD151P48509 253 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 FOXL2P58012 376 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 DYNLT1P63172 113 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 PRKD1Q15139 912 aaPredicted RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 TUBB8Q3ZCM7 444 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 RPTNQ6XPR3 784 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 BZW1Q7L1Q6 419 aaKnown RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 TRIM73Q86UV7 250 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 ZNF808Q8N4W9 903 aaPredicted RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 IPMKQ8NFU5 416 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 DENND1AQ8TEH3 1009 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 HEXDCQ8WVB3 486 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 ULK4Q96C45 1275 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 MRGPRX2Q96LB1 330 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 MAGEB10Q96LZ2 347 aaPredicted RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 TRIM56Q9BRZ2 755 aaKnown RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 OR52A5Q9H2C5 316 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 XKR8Q9H6D3 395 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 WDR54Q9H977 334 aa15.51■□□□□ 0.07
DDX56-210ENST00000479440 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
DDX56-210ENST00000479440 CSMD2Q7Z408 3487 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 C2orf81A6NN90 581 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 SOCS6O14544 535 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 PCDH17O14917 1159 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 SGTAO43765 313 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 KRT1P04264 644 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 H2AFZP0C0S5 128 aa15.5■□□□□ 0.07
DDX56-210ENST00000479440 PIM1P11309 404 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms