RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ULBP3Q9BZM4 244 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 VPS37BQ9H9H4 285 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
USP11-207ENST00000478596 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
USP11-207ENST00000478596 CHRAC1Q9NRG0 131 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 ZDHHC18Q9NUE0 388 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 KCTD5Q9NXV2 234 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 ITGB1BP2Q9UKP3 347 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 ANKHD1Q8IWZ3 2542 aaKnown RBP14.18□□□□□ -0.14
USP11-207ENST00000478596 GLYATL1P3A0A0U1RQE8 302 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 PRSS38A1L453 326 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 LDB2O43679 373 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 TTC4O95801 387 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 ITGALP20701 1170 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 HMGCLP35914 325 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 TRIM23P36406 574 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 MAGEA3P43357 314 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 GPR1P46091 355 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 SPINT3P49223 89 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 VSNL1P62760 191 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 THOC5Q13769 683 aaKnown RBP14.18□□□□□ -0.14
USP11-207ENST00000478596 PTPRCAPQ14761 206 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
USP11-207ENST00000478596 CHRNA6Q15825 494 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 GDF7Q7Z4P5 450 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 TMC3Q7Z5M5 1100 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 GDAP1Q8TB36 358 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 PATE1Q8WXA2 126 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 C9orf72Q96LT7 481 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 COQ10AQ96MF6 247 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 EBNA1BP2Q99848 306 aaKnown RBP14.18□□□□□ -0.14
USP11-207ENST00000478596 PHACTR1Q9C0D0 580 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 TRNAU1APQ9NX07 287 aaKnown RBP14.18□□□□□ -0.14
USP11-207ENST00000478596 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
USP11-207ENST00000478596 POLEQ07864 2286 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 TNRC6AQ8NDV7 1962 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 FAM237BA0A1B0GVD1 139 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 A8MU76 341 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 DIAPH2O60879 1101 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ERLIN1O75477 346 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 CEACAM4O75871 244 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 TUBBP07437 444 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ZNF28P17035 718 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 BPIP17213 487 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 NMBRP28336 390 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 MC4RP32245 332 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 PTGER4P35408 488 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 MAGEA4P43358 317 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ITGA1P56199 1179 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 PER3P56645 1201 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 DCDC1P59894 354 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 PTSQ03393 145 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 PEX6Q13608 980 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ELOAQ14241 798 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 CRYMQ14894 314 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 SLMAPQ14BN4 828 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 SPANXN3Q5MJ09 141 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 SNAP47Q5SQN1 464 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ARMC3Q5W041 872 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 CPZQ66K79 652 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 TAS2R42Q7RTR8 314 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 GALNT6Q8NCL4 622 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 OR10G6Q8NH81 332 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 AHCYL2Q96HN2 611 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 TTC25Q96NG3 672 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 PLEKHG4BQ96PX9 1271 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 TRIM56Q9BRZ2 755 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 ZSCAN5AQ9BUG6 496 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 RIOK2Q9BVS4 552 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 KIFC1Q9BW19 673 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 ZMYND15Q9H091 742 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 C20orf96Q9NUD7 363 aaPredicted RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 ASF1BQ9NVP2 202 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 NLE1Q9NVX2 485 aaPredicted RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 SIDT1Q9NXL6 827 aaKnown RBP14.17□□□□□ -0.14
USP11-207ENST00000478596 IL17CQ9P0M4 197 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 SLC2A6Q9UGQ3 507 aa14.17□□□□□ -0.14
USP11-207ENST00000478596 CROCCQ5TZA2 2017 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 RGSL1A5PLK6 1076 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 MROH6A6NGR9 719 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 PRSS44E7EML9 344 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 TP73O15350 636 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 USP1O94782 785 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 VAPBO95292 243 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 PYGLP06737 847 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 AKT1P31749 480 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 PHBP35232 272 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 FASLGP48023 281 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 CCL11P51671 97 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 DNASE1L3Q13609 305 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 ITGA9Q13797 1035 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 UGT8Q16880 541 aa14.16□□□□□ -0.14
USP11-207ENST00000478596 LONRF1Q17RB8 773 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms