RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	RPTN	Q6XPR3	784 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	DET1	Q7L5Y6	550 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	CFAP206	Q8IYR0	622 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
APTX-222	ENST00000478279	LINC00615	Q96LM1	132 aa	Predicted RBP	10.22	□□□□□ -0.77
APTX-222	ENST00000478279	FERD3L	Q96RJ6	166 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	TRIM56	Q9BRZ2	755 aa	Known RBP	10.22	□□□□□ -0.77
APTX-222	ENST00000478279	CCM2	Q9BSQ5	444 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	LHPP	Q9H008	270 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	TFB2M	Q9H5Q4	396 aa	Known RBP	10.22	□□□□□ -0.77
APTX-222	ENST00000478279	FAM60A	Q9NP50	221 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	SMOX	Q9NWM0	555 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	DHCR7	Q9UBM7	475 aa	Known RBP	10.22	□□□□□ -0.77
APTX-222	ENST00000478279	FAM8A1	Q9UBU6	413 aa		10.22	□□□□□ -0.77
APTX-222	ENST00000478279	CACNA1C	Q13936	2221 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	TRGV8	A0A0C4DH27	118 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	CCL21	O00585	134 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	SOCS6	O14544	535 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	GAPDHS	O14556	408 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ZSCAN9	O15535	394 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-222	ENST00000478279	HCRTR1	O43613	425 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	PRICKLE3	O43900	615 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ALOX12B	O75342	701 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	PMPCB	O75439	489 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	GABRA4	P48169	554 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	BCL7A	Q4VC05	210 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ISLR2	Q6UXK2	745 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	GFRAL	Q6UXV0	394 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	DAAM2	Q86T65	1068 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	HOOK3	Q86VS8	718 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	AMIGO1	Q86WK6	493 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ADGRF3	Q8IZF5	1079 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-222	ENST00000478279	C19orf47	Q8N9M1	422 aa	Known RBP	10.21	□□□□□ -0.77
APTX-222	ENST00000478279	CATSPER1	Q8NEC5	780 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	OR1N1	Q8NGS0	311 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ZNF398	Q8TD17	642 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	NR4A3	Q92570	626 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	RNF157	Q96PX1	679 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	LMF1	Q96S06	567 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	NRTN	Q99748	197 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	CHRNA10	Q9GZZ6	450 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	THAP2	Q9H0W7	228 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	DEF6	Q9H4E7	631 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	GLOD4	Q9HC38	313 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	SLC22A11	Q9NSA0	550 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	ACTR10	Q9NZ32	417 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	HACD3	Q9P035	362 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	CDC23	Q9UJX2	597 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	HEY1	Q9Y5J3	304 aa		10.21	□□□□□ -0.77
APTX-222	ENST00000478279	LOC285095	A0A1B0GVY8	99 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	KCNN4	O15554	427 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	SGTA	O43765	313 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	DIAPH2	O60879	1101 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	EPO	P01588	193 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	CTSB	P07858	339 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	SKIL	P12757	684 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	KRTAP10-9	P60411	292 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	MYL5	Q02045	173 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	MFAP5	Q13361	173 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	PDK1	Q15118	436 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	NOMO1	Q15155	1222 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	ZIC1	Q15915	447 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	DEFB110	Q30KQ9	67 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	TEX44	Q53QW1	395 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	TLDC1	Q6P9B6	456 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	XKRX	Q6PP77	449 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	SARM1	Q6SZW1	724 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	SPESP1	Q6UW49	350 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	KIRREL2	Q6UWL6	708 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	TMEM207	Q6UWW9	146 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	LINC00696	Q6ZRV3	163 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	CDH24	Q86UP0	819 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	ZNF655	Q8N720	491 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-222	ENST00000478279	PLD5	Q8N7P1	536 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	OR52E1	Q8NGJ3	308 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	HM13	Q8TCT9	377 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	NAT14	Q8WUY8	206 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	CPLX3	Q8WVH0	158 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	RBM41	Q96IZ5	413 aa	Known RBP	10.2	□□□□□ -0.78
APTX-222	ENST00000478279	THOC3	Q96J01	351 aa	Known RBP	10.2	□□□□□ -0.78
APTX-222	ENST00000478279	VPS50	Q96JG6	964 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-222	ENST00000478279	TAAR6	Q96RI8	345 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	NDC1	Q9BTX1	674 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	UBP1	Q9NZI7	540 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279	PKP3	Q9Y446	797 aa		10.2	□□□□□ -0.78
APTX-222	ENST00000478279		A0A0A6YYK5	440 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-222	ENST00000478279	IFRD1	O00458	451 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-222	ENST00000478279	BUD23	O43709	281 aa	Known RBP	10.19	□□□□□ -0.78
APTX-222	ENST00000478279	KLHL18	O94889	574 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	ONECUT2	O95948	504 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	ALB	P02768	609 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	CYP1A2	P05177	515 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	ALAS2	P22557	587 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	KDELR1	P24390	212 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	PBX1	P40424	430 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	CA7	P43166	264 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	CD151	P48509	253 aa		10.19	□□□□□ -0.78
APTX-222	ENST00000478279	WNT3A	P56704	352 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms