RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TRIT1Q9H3H1 467 aaKnown RBP15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SRMSQ9H3Y6 488 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 FBXO8Q9NRD0 319 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 WDR70Q9NW82 654 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.15■□□□□ 0.02
HMGA1-206ENST00000478214 SEMA5BQ9P283 1151 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 FAM169AQ9Y6X4 670 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 PTPRQQ9UMZ3 2332 aa15.15■□□□□ 0.02
HMGA1-206ENST00000478214 TLCD2A6NGC4 264 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 BTN3A3O00478 584 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 TP73O15350 636 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 SLCO2B1O94956 709 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 ESR1P03372 595 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 SLC1A2P43004 574 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 KPNA2P52292 529 aaKnown RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 ADARP55265 1226 aaKnown RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 ABRQ12979 859 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 CRYMQ14894 314 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 TMED2Q15363 201 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 HP1BP3Q5SSJ5 553 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 FBXO38Q6PIJ6 1188 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 AMIGO1Q86WK6 493 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 TBC1D21Q8IYX1 336 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 PDIK1LQ8N165 341 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 OR5K2Q8NHB8 316 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 CFAP61Q8NHU2 1237 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 UBXN4Q92575 508 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 CD180Q99467 661 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 FBXO6Q9NRD1 293 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 INTS10Q9NVR2 710 aaKnown RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 ICKQ9UPZ9 632 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 TDRKHQ9Y2W6 561 aaKnown RBP15.14■□□□□ 0.01
HMGA1-206ENST00000478214 SNX24Q9Y343 169 aa15.14■□□□□ 0.01
HMGA1-206ENST00000478214 GSAPA4D1B5 854 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 H3BMM5 538 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 SMAPO00193 183 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 BTN3A1O00481 513 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 POLR1CO15160 346 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 RAD51CO43502 376 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 TPBGLP0DKB5 382 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 LIPCP11150 499 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 PKMP14618 531 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 CD82P27701 267 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 RPL21P46778 160 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 FOXM1Q08050 763 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 PRKAA1Q13131 559 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 KCNAB1Q14722 419 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 BROXQ5VW32 411 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 CEACAM20Q6UY09 585 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 OTOAQ7RTW8 1153 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 KCNMB4Q86W47 210 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 DTX1Q86Y01 620 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 ADGRF3Q8IZF5 1079 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 SLC41A2Q96JW4 573 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 TEFMQ96QE5 360 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 WDR83Q9BRX9 315 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 PLAC1Q9HBJ0 212 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 IARS2Q9NSE4 1012 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 GALPQ9UBC7 116 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 POLG2Q9UHN1 485 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
HMGA1-206ENST00000478214 POMT2Q9UKY4 750 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 PLAGL1Q9UM63 463 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 VPS9D1Q9Y2B5 631 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
HMGA1-206ENST00000478214 NBEAQ8NFP9 2946 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 FAM187AA6NFU0 413 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 STMND1H3BQB6 276 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 KPNA5O15131 536 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 TTC4O95801 387 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 ERVK-10P10266 1014 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 FOLR1P15328 257 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 CHRM3P20309 590 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 ELK3P41970 407 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 MPP1Q00013 466 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 SRSF6Q13247 344 aaKnown RBP15.12■□□□□ 0.01
HMGA1-206ENST00000478214 HIF1AQ16665 826 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 SPANXN3Q5MJ09 141 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 PLEKHS1Q5SXH7 462 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 ZNF549Q6P9A3 640 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 MAATS1Q7Z4T9 603 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 SPNS2Q8IVW8 549 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 LMNTD2Q8IXW0 634 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 SIDT2Q8NBJ9 832 aaKnown RBP15.12■□□□□ 0.01
HMGA1-206ENST00000478214 GSDMBQ8TAX9 411 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 CALML6Q8TD86 181 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 RNF31Q96EP0 1072 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 ELMO2Q96JJ3 720 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 OR6C1Q96RD1 312 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 ERP44Q9BS26 406 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 FAM167BQ9BTA0 163 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 NAT9Q9BTE0 207 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 DPH5Q9H2P9 285 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 PRORYQ9H606 182 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 CPNE5Q9HCH3 593 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms