RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SDF4Q9BRK5 362 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 GCOM2Q9BZD3 368 aaPredicted RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 RNF41Q9H4P4 317 aaPredicted RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 KAT14Q9H8E8 782 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 PEMTQ9UBM1 199 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 NDRG3Q9UGV2 375 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 HSF4Q9ULV5 492 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 PROCRQ9UNN8 238 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 LAMA4Q16363 1823 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 KNTC1P50748 2209 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 AHCTF1Q8WYP5 2266 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 A0A1B0GVM2 712 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 DYTNA2CJ06 578 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 TEX22C9J3V5 150 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 KLRF2D3W0D1 207 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 SPECC1L-ADORA2AF8WAN1 911 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 J3KR12 359 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 ACOT8O14734 319 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 CCL16O15467 120 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 ATP2C2O75185 946 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 SERPINI2O75830 405 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 C22orf31O95567 290 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 APBB3O95704 486 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 ZNF12P17014 697 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 FCARP24071 287 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 EIF2S3P41091 472 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 OR1G1P47890 313 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 PPM1FP49593 454 aaPredicted RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 SEC61A1P61619 476 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 YWHAZP63104 245 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 BNC1Q01954 994 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 CYP4A11Q02928 519 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 GFPT1Q06210 699 aaPredicted RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 FCHO2Q0JRZ9 810 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 GRSF1Q12849 480 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS50-214ENST00000477935 EFHC1Q5JVL4 640 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 CYP4A22Q5TCH4 519 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 CAPRIN2Q6IMN6 1127 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 TYW3Q6IPR3 259 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 VITQ6UXI7 678 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 MFSD6Q6ZSS7 791 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 CREB3L2Q70SY1 520 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 HAUS6Q7Z4H7 955 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 GLRX5Q86SX6 157 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 SFTPA2Q8IWL1 248 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 AADATQ8N5Z0 425 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 TNIP2Q8NFZ5 429 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 TMED6Q8WW62 240 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 ESR2Q92731 530 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 MAELQ96JY0 434 aaKnown RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 GPR63Q9BZJ6 419 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 C6orf106Q9H6K1 298 aaPredicted RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 ECHDC1Q9NTX5 307 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 C2orf42Q9NWW7 574 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 MARCH5Q9NX47 278 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 RRN3Q9NYV6 651 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 ANKMY1Q9P2S6 941 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 PRG3Q9Y2Y8 225 aaPredicted RBP4.63□□□□□ -1.67
VPS50-214ENST00000477935 UBIAD1Q9Y5Z9 338 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 NFASCO94856 1347 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 LRRK2Q5S007 2527 aa4.63□□□□□ -1.67
VPS50-214ENST00000477935 TICRRQ7Z2Z1 1910 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 MYH15Q9Y2K3 1946 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 RELNP78509 3460 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 IGLV5-52A0A0A0MRZ9 124 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 GOLGA6L10A0A0M3HER8 536 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 TYW5A2RUC4 315 aaKnown RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 HSPB2A8KAH6 182 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 GUCY1B2O75343 617 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 TADA2AO75478 443 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 POLBP06746 335 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 CD59P13987 128 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ZNF8P17098 575 aaPredicted RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 RPL3P39023 403 aaKnown RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 DHPSP49366 369 aaPredicted RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 GPC3P51654 580 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ART1P52961 327 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 KIF5AQ12840 1032 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 RUNX2Q13950 521 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 NFATC4Q14934 902 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ZRSR2Q15696 482 aaKnown RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 HSPB2Q16082 182 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 NFIL3Q16649 462 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 DUOXA1Q1HG43 343 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 TMEM95Q3KNT9 176 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 FUT10Q6P4F1 479 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 LPCAT2Q7L5N7 544 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 TBC1D26Q86UD7 250 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 PLD5Q8N7P1 536 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 RBMXL3Q8N7X1 1067 aaKnown RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 LEMD2Q8NC56 503 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ARRDC2Q8TBH0 407 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ING5Q8WYH8 240 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 FRAT1Q92837 279 aaPredicted RBP4.62□□□□□ -1.67
VPS50-214ENST00000477935 FIZ1Q96SL8 496 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 GAD1Q99259 594 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 ZNF302Q9NR11 478 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 SNTG1Q9NSN8 517 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 IL1RAPL1Q9NZN1 696 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms