RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 YIPF6Q96EC8 236 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 MARK4Q96L34 752 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 BFARQ9NZS9 450 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 OPTCQ9UBM4 332 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 TSPAN16Q9UKR8 245 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 SARDHQ9UL12 918 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 ENTPD4Q9Y227 616 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 NDUFAF1Q9Y375 327 aa12.45□□□□□ -0.42
RTFDC1-207ENST00000477573 CASP8AP2Q9UKL3 1982 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SCN1AP35498 2009 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 A0A1B0GTQ1 180 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 A0A1W2PRQ8 180 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 AQP12BA6NM10 295 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 WRBO00258 174 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 PIRO00625 290 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 CYP11A1P05108 521 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 ELK4P28324 431 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 TAF6P49848 677 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 MAP2K6P52564 334 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 PER3P56645 1201 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 CAP1Q01518 475 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC10A2Q12908 348 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 NFX1Q12986 1120 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SLAMF1Q13291 335 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 THAP5Q7Z6K1 395 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 GALNT10Q86SR1 603 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 AQP12AQ8IXF9 295 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM71DQ8N9W8 422 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SPATA18Q8TC71 538 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC22A17Q8WUG5 538 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC13A3Q8WWT9 602 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 RBPMSQ93062 196 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 PTERQ96BW5 349 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 TRMT2BQ96GJ1 504 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 ZSWIM3Q96MP5 696 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC23A1Q9UHI7 598 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 CYTH4Q9UIA0 394 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 TRAPPC4Q9Y296 219 aa12.44□□□□□ -0.42
RTFDC1-207ENST00000477573 PMS2P1A4D2B8 440 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ARGFXA6NJG6 315 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 F8VP50 259 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 STX16O14662 325 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 KHNYNO15037 678 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ALPPP05187 535 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ITGAVP06756 1048 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 MAGP20916 626 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 HK3P52790 923 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ARPP19P56211 112 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 PSME3P61289 254 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ALDH6A1Q02252 535 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 SP3Q02447 781 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 GRIK2Q13002 908 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 FADDQ13158 208 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 MTM1Q13496 603 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 INPP5AQ14642 412 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 DUSP6Q16828 381 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 BCL7AQ4VC05 210 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 KLHL12Q53G59 568 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 LRFN4Q6PJG9 635 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ZYG11AQ6WRX3 759 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 CEP68Q76N32 757 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 NRARPQ7Z6K4 114 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM35AQ86V20 835 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 MPP5Q8N3R9 675 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 NAT8LQ8N9F0 302 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 GOT1L1Q8NHS2 421 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 RAB7BQ96AH8 199 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 TOX2Q96NM4 488 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 WDR83Q9BRX9 315 aaKnown RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ALOXE3Q9BYJ1 711 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ZNF385DQ9H6B1 395 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 KLK14Q9P0G3 267 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 SCML1Q9UN30 329 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 U3KQ87 197 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 CIB4A0PJX0 185 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 CCDC154A6NI56 674 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 GPR182O15218 404 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 B4GAT1O43505 415 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 BANF1O75531 89 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 GSRP00390 522 aa12.43□□□□□ -0.42
RTFDC1-207ENST00000477573 IL6P05231 212 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms