RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NFATC4Q14934 902 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 ZSCAN26Q16670 478 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
MRPL55-227ENST00000475832 SBSNQ6UWP8 590 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 SLC36A4Q6YBV0 504 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 FRMD7Q6ZUT3 714 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 OXR1Q8N573 874 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 PDPRQ8NCN5 879 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 OR56A4Q8NGH8 313 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 WDR92Q96MX6 357 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 MYOCQ99972 504 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 TIMM29Q9BSF4 260 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 GPR174Q9BXC1 333 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 NCDNQ9UBB6 729 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 DCTN4Q9UJW0 460 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 ACSL5Q9ULC5 683 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 SLC17A4Q9Y2C5 497 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 PCDHGA2Q9Y5H1 932 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 BPTFQ12830 3046 aa11.97□□□□□ -0.49
MRPL55-227ENST00000475832 FANCMQ8IYD8 2048 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 TRPC5OSA6NMA1 111 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 LILRB5O75023 590 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 KIAA0754O94854 1291 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 SLC35G4P0C7Q5 338 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 MTHFD2P13995 350 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 PREPP48147 710 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 AQP5P55064 265 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 LCP2Q13094 533 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 PCBP2Q15366 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 RBBP7Q16576 425 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 PPP1R3AQ16821 1122 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 USP39Q53GS9 565 aaKnown RBP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 TSSK4Q6SA08 328 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 UNC5DQ6UXZ4 953 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 EFL1Q7Z2Z2 1120 aaKnown RBP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 CFAP61Q8NHU2 1237 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 THOC1Q96FV9 657 aaKnown RBP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 CCDC138Q96M89 665 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 RILPQ96NA2 401 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 RTKNQ9BST9 563 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 LGR4Q9BXB1 951 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 C1QTNF3Q9BXJ4 246 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 TPSD1Q9BZJ3 242 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 FZD3Q9NPG1 666 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 ZSCAN32Q9NX65 697 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 MBD1Q9UIS9 605 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-227ENST00000475832 ADAMTS6Q9UKP5 1117 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 CDYLQ9Y232 598 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.49
MRPL55-227ENST00000475832 IGHV1OR15-9A0A0B4J2B8 117 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 GFYI3L273 518 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 TNFRSF10CO14798 259 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 AXIN1O15169 862 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 MAP3K13O43283 966 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 KDM1AO60341 852 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 KATNA1O75449 491 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 PSIP1O75475 530 aaKnown RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 MATN4O95460 622 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CHEK2O96017 543 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 RPS17P08708 135 aaKnown RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 IDSP22304 550 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 ARL1P40616 181 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 PKNOX1P55347 436 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CLCQ05315 142 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 SH2D4BQ5SQS7 431 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 ENPP7Q6UWV6 458 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CHST15Q7LFX5 561 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CUZD1Q86UP6 607 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 DCP2Q8IU60 420 aaKnown RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 ZNF547Q8IVP9 402 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 RAB42Q8N4Z0 105 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 ZNF781Q8N8C0 355 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 FBXO15Q8NCQ5 510 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CADM4Q8NFZ8 388 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 UBTD2Q8WUN7 234 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 SNX19Q92543 992 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 SORT1Q99523 831 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 HGH1Q9BTY7 390 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 TMEM120AQ9BXJ8 343 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 GSTO2Q9H4Y5 243 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 C6orf106Q9H6K1 298 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CD93Q9NPY3 652 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 KLQ9UEF7 1012 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 HAO1Q9UJM8 370 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 PDE10AQ9Y233 779 aa11.95□□□□□ -0.5
MRPL55-227ENST00000475832 CCDC163A0A0D9SF12 145 aa11.94□□□□□ -0.5
MRPL55-227ENST00000475832 TMEM202A6NGA9 273 aa11.94□□□□□ -0.5
MRPL55-227ENST00000475832 ERICH4A6NGS2 130 aa11.94□□□□□ -0.5
MRPL55-227ENST00000475832 ZNF839A8K0R7 811 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms