RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 RDH11Q8TC12 318 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 LINC00615Q96LM1 132 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 RMDN2Q96LZ7 410 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 SORT1Q99523 831 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 LRMDAQ9H2I8 198 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 PNPOQ9NVS9 261 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 QSOX1O00391 747 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 FFAR2O15552 330 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SNX2O60749 519 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 EDF1O60869 148 aaKnown RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SUPT7LO94864 414 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 EML2O95834 649 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SERPINE1P05121 402 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 ALG11Q2TAA5 492 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 UNC50Q53HI1 259 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 ABI3BPQ7Z7G0 1075 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 GALNT13Q8IUC8 556 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SFTPA2Q8IWL1 248 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SLC22A15Q8IZD6 547 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 DCBLD1Q8N8Z6 715 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 ZNF514Q96K75 400 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 WDR92Q96MX6 357 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 HS3ST3A1Q9Y663 406 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 TRBV23OR9-2A0A075B6M9 112 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 ARHGEF33A8MVX0 844 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 KMOO15229 486 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 TAPBPO15533 448 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SMIM24O75264 130 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SNNO75324 88 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 RASGRP1O95267 797 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 CELA2BP08218 269 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 CBSLP0DN79 551 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 EEF1DP29692 281 aaKnown RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 CBSP35520 551 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 RPIAP49247 311 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 OCRLQ01968 901 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SETDB1Q15047 1291 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 ARL13AQ5H913 290 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-217ENST00000475693 C1orf210Q8IVY1 113 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 EGFL8Q99944 293 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 PRDM8Q9NQV8 689 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 USH1CQ9Y6N9 552 aa17.66■□□□□ 0.42
ATG4B-217ENST00000475693 SPAG17Q6Q759 2223 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 MEI4A8MW99 385 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 KPNA5O15131 536 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 LAMTOR5O43504 91 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 MATN4O95460 622 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 RPSAP08865 295 aaKnown RBP17.65■□□□□ 0.42
ATG4B-217ENST00000475693 TDGF1P13385 188 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 CLCNKAP51800 687 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 ABCE1P61221 599 aaKnown RBP17.65■□□□□ 0.42
ATG4B-217ENST00000475693 PRKG2Q13237 762 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 ZNF678Q5SXM1 525 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 ADAMTSL2Q86TH1 951 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 RGL4Q8IZJ4 473 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 PYCR2Q96C36 320 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 WWP1Q9H0M0 922 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 OR52A5Q9H2C5 316 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 KLHL42Q9P2K6 505 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 PLAGL1Q9UM63 463 aa17.65■□□□□ 0.42
ATG4B-217ENST00000475693 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 FAM86C2PA6NEL3 165 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 TMEM233B4DJY2 109 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 F8W8V4 182 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 GFYI3L273 518 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 UBFD1O14562 309 aaKnown RBP17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ENO3P13929 434 aaPredicted RBP17.64■□□□□ 0.42
ATG4B-217ENST00000475693 MPSTP25325 297 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 HTR1BP28222 390 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 HSPA7P48741 367 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 KIAA1024LP59773 190 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.42
ATG4B-217ENST00000475693 METRNLQ641Q3 311 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ZNF781Q8N8C0 355 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 PPFIBP2Q8ND30 876 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 RFWD2Q8NHY2 731 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 HM13Q8TCT9 377 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 GLMNQ92990 594 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 SPACA7Q96KW9 195 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ZDHHC5Q9C0B5 715 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ATG10Q9H0Y0 220 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 NPHS2Q9NP85 383 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 SEMA4BQ9NPR2 832 aaPredicted RBP17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ARL15Q9NXU5 204 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 SCHIP1Q9P0W5 487 aaPredicted RBP17.64■□□□□ 0.42
ATG4B-217ENST00000475693 KLQ9UEF7 1012 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 DCTN4Q9UJW0 460 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 OARD1Q9Y530 152 aa17.64■□□□□ 0.42
ATG4B-217ENST00000475693 ZFC3H1O60293 1989 aaKnown RBP17.64■□□□□ 0.41
ATG4B-217ENST00000475693 THADAQ6YHU6 1953 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 OR52A4PA6NMU1 304 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 DCTN3O75935 186 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 IMPDH1P20839 514 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 ITPKAP23677 461 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 CD27P26842 260 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 CSNK1EP49674 416 aaKnown RBP17.64■□□□□ 0.41
ATG4B-217ENST00000475693 CTBSQ01459 385 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 EIF2B5Q13144 721 aaKnown RBP17.64■□□□□ 0.41
ATG4B-217ENST00000475693 C1orf61Q13536 156 aa17.64■□□□□ 0.41
ATG4B-217ENST00000475693 FZD2Q14332 565 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms