RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CRLF3Q8IUI8 442 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 SDR16C5Q8N3Y7 309 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 FSTL5Q8N475 847 aaPredicted RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 ZBTB2Q8N680 514 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 ATL1Q8WXF7 558 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 SCAMP4Q969E2 229 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 NXNL1Q96CM4 212 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 ATXN7L3BQ96GX2 97 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 COX14Q96I36 57 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 GPR21Q99679 349 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 CCT7Q99832 543 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 WRAP53Q9BUR4 548 aaKnown RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 ILKAPQ9H0C8 392 aaPredicted RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 WDR26Q9H7D7 661 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 CAB39LQ9H9S4 337 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 TM7SF3Q9NS93 570 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 WSB2Q9NYS7 404 aaPredicted RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 TMEM216Q9P0N5 145 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 VTI1BQ9UEU0 232 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
SHQ1-207ENST00000475558 PCDHGB2Q9Y5G2 931 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 CHD5Q8TDI0 1954 aa6.89□□□□□ -1.31
SHQ1-207ENST00000475558 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 A0A087WV48 116 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 FAM181BA6NEQ2 426 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 TRABD2BA6NFA1 517 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF839A8K0R7 811 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MEI4A8MW99 385 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CCL22O00626 93 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CHUKO15111 745 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 FLRT2O43155 660 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 PHGDHO43175 533 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 LATO43561 262 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 OR1I1O60431 355 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 NPHS1O60500 1241 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 SNX2O60749 519 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 GPC4O75487 556 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 POP7O75817 140 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 IPO13O94829 963 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 SEMA4FO95754 770 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MYCLP1P12525 358 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CD1DP15813 335 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 TFEBP19484 476 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CYP2A7P20853 494 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 HNRNPA2B1P22626 353 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MAOBP27338 520 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MAP4P27816 1152 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 RABIFP47224 123 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 PIK3CGP48736 1102 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CLCNKAP51800 687 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 ALDH18A1P54886 795 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CDKN2DP55273 166 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 IRX1P78414 480 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CDK3Q00526 305 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CDKL1Q00532 357 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 NFKB2Q00653 900 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CYP4F3Q08477 520 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 LRP8Q14114 963 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 INPP5AQ14642 412 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 POM121L1PQ3SYA9 428 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CTSL3PQ5NE16 218 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 RBM20Q5T481 1227 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 KIAA0895LQ68EN5 471 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 SULT1C3Q6IMI6 304 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 DBX2Q6ZNG2 339 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 EFL1Q7Z2Z2 1120 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CMC1Q7Z7K0 106 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 LRRTM4Q86VH4 590 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 IQCHQ86VS3 1027 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 AMZ2Q86W34 360 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 GPSM1Q86YR5 675 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CEP97Q8IW35 865 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 WDR75Q8IWA0 830 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 RAB42Q8N4Z0 105 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 FBXO15Q8NCQ5 510 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 OR2L2Q8NH16 312 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MGARPQ8TDB4 240 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 BCAS4Q8TDM0 211 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 RHBDD1Q8TEB9 315 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 TOE1Q96GM8 510 aaKnown RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 C7orf26Q96N11 449 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 GPR78Q96P69 363 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF317Q96PQ6 595 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 SMIM14Q96QK8 99 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 UBL7Q96S82 380 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 CCT8L2Q96SF2 557 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 NDNQ99608 321 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 KLF6Q99612 283 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-207ENST00000475558 OLFM1Q99784 485 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 TUBB6Q9BUF5 446 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 APOOQ9BUR5 198 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 SLC12A9Q9BXP2 914 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
SHQ1-207ENST00000475558 MIR1-1HGQ9H1L0 117 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms