RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DPP10Q8N608 796 aa21.29■■□□□ 1
CCM2-206ENST00000474617 L3MBTL4Q8NA19 623 aa21.29■■□□□ 1
CCM2-206ENST00000474617 FBXO15Q8NCQ5 510 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 OR2T11Q8NH01 316 aa21.29■■□□□ 1
CCM2-206ENST00000474617 DNAJB8Q8NHS0 232 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SKA2Q8WVK7 121 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 NXPE3Q969Y0 559 aa21.29■■□□□ 1
CCM2-206ENST00000474617 MRPL38Q96DV4 380 aaKnown RBP21.29■■□□□ 1
CCM2-206ENST00000474617 ZNF570Q96NI8 536 aa21.29■■□□□ 1
CCM2-206ENST00000474617 ZBTB18Q99592 522 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SLC52A3Q9NQ40 469 aa21.29■■□□□ 1
CCM2-206ENST00000474617 HPS4Q9NQG7 708 aa21.29■■□□□ 1
CCM2-206ENST00000474617 MYO7AQ13402 2215 aa21.28■■□□□ 1
CCM2-206ENST00000474617 FADS2P1A8MWK0 482 aa21.28■■□□□ 1
CCM2-206ENST00000474617 ARNTLO00327 626 aa21.28■■□□□ 1
CCM2-206ENST00000474617 SGTAO43765 313 aa21.28■■□□□ 1
CCM2-206ENST00000474617 PSIP1O75475 530 aaKnown RBP21.28■■□□□ 1
CCM2-206ENST00000474617 ADRB3P13945 408 aa21.28■■□□□ 1
CCM2-206ENST00000474617 CAPN3P20807 821 aa21.28■■□□□ 1
CCM2-206ENST00000474617 PRPH2P23942 346 aa21.28■■□□□ 1
CCM2-206ENST00000474617 DIO3P55073 304 aa21.28■■□□□ 1
CCM2-206ENST00000474617 TMEM115Q12893 351 aaPredicted RBP21.28■■□□□ 1
CCM2-206ENST00000474617 ZNF234Q14588 700 aa21.28■■□□□ 1
CCM2-206ENST00000474617 CACHD1Q5VU97 1274 aa21.28■■□□□ 1
CCM2-206ENST00000474617 ZFAND4Q86XD8 727 aa21.28■■□□□ 1
CCM2-206ENST00000474617 PQLC1Q8N2U9 271 aa21.28■■□□□ 1
CCM2-206ENST00000474617 SFRP1Q8N474 314 aa21.28■■□□□ 1
CCM2-206ENST00000474617 ZUFSPQ96AP4 578 aa21.28■■□□□ 1
CCM2-206ENST00000474617 METTL2AQ96IZ6 378 aaKnown RBP21.28■■□□□ 1
CCM2-206ENST00000474617 CCDC138Q96M89 665 aa21.28■■□□□ 1
CCM2-206ENST00000474617 EFHD1Q9BUP0 239 aa21.28■■□□□ 1
CCM2-206ENST00000474617 ACTR8Q9H981 624 aa21.28■■□□□ 1
CCM2-206ENST00000474617 DNAJC11Q9NVH1 559 aa21.28■■□□□ 1
CCM2-206ENST00000474617 THAP10Q9P2Z0 257 aaPredicted RBP21.28■■□□□ 1
CCM2-206ENST00000474617 AP3M1Q9Y2T2 418 aa21.28■■□□□ 1
CCM2-206ENST00000474617 TMED5Q9Y3A6 229 aa21.28■■□□□ 1
CCM2-206ENST00000474617 MAPK1P28482 360 aa21.27■■□□□ 1
CCM2-206ENST00000474617 GRIA2P42262 883 aa21.27■■□□□ 1
CCM2-206ENST00000474617 GNPDA1P46926 289 aa21.27■■□□□ 1
CCM2-206ENST00000474617 SLC6A11P48066 632 aa21.27■■□□□ 1
CCM2-206ENST00000474617 AP5B1Q2VPB7 878 aa21.27■■□□□ 1
CCM2-206ENST00000474617 VPS26BQ4G0F5 336 aa21.27■■□□□ 1
CCM2-206ENST00000474617 ERN2Q76MJ5 926 aaKnown RBP21.27■■□□□ 1
CCM2-206ENST00000474617 DET1Q7L5Y6 550 aa21.27■■□□□ 1
CCM2-206ENST00000474617 PLCD3Q8N3E9 789 aa21.27■■□□□ 1
CCM2-206ENST00000474617 BHLHE22Q8NFJ8 381 aaPredicted RBP21.27■■□□□ 1
CCM2-206ENST00000474617 LRRC58Q96CX6 371 aa21.27■■□□□ 1
CCM2-206ENST00000474617 NUS1Q96E22 293 aa21.27■■□□□ 1
CCM2-206ENST00000474617 CDK15Q96Q40 435 aa21.27■■□□□ 1
CCM2-206ENST00000474617 KLHL4Q9C0H6 718 aa21.27■■□□□ 1
CCM2-206ENST00000474617 MAP10Q9P2G4 905 aa21.27■■□□□ 1
CCM2-206ENST00000474617 CCL27Q9Y4X3 112 aa21.27■■□□□ 1
CCM2-206ENST00000474617 C2orf16Q68DN1 1984 aa21.27■□□□□ 0.99
CCM2-206ENST00000474617 C17orf113A0A1B0GUU1 675 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 SLC5A10A0PJK1 596 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 TBC1D3BA6NDS4 549 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 H3BNX3 289 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 MANBAO00462 879 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 VEGFDO43915 354 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 RHDQ02161 417 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 GTF2H3Q13889 308 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 ABRAXAS2Q15018 415 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 IMPG1Q17R60 797 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 C10orf62Q5T681 223 aaPredicted RBP21.26■□□□□ 0.99
CCM2-206ENST00000474617 LIPJQ5W064 366 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 SLC22A15Q8IZD6 547 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 MYLIPQ8WY64 445 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 ELSPBP1Q96BH3 223 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 LINC00615Q96LM1 132 aaPredicted RBP21.26■□□□□ 0.99
CCM2-206ENST00000474617 TSR3Q9UJK0 312 aaKnown RBP21.26■□□□□ 0.99
CCM2-206ENST00000474617 GPR34Q9UPC5 381 aa21.26■□□□□ 0.99
CCM2-206ENST00000474617 KLHL33A6NCF5 533 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 RSL1D1O76021 490 aaKnown RBP21.25■□□□□ 0.99
CCM2-206ENST00000474617 SLC7A2P52569 658 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 PNLIPRP1P54315 467 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 GRIN2CQ14957 1233 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 C18orf21Q32NC0 220 aaPredicted RBP21.25■□□□□ 0.99
CCM2-206ENST00000474617 IRGCQ6NXR0 463 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 ANKRD54Q6NXT1 300 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 CYP20A1Q6UW02 462 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 VITQ6UXI7 678 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 RETREG3Q86VR2 466 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 RASGEF1AQ8N9B8 481 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 GDPD5Q8WTR4 605 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 ARRDC3Q96B67 414 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 LRGUKQ96M69 825 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 FAM129BQ96TA1 746 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 PBX4Q9BYU1 374 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 ZNF490Q9ULM2 529 aaPredicted RBP21.25■□□□□ 0.99
CCM2-206ENST00000474617 DENND4AQ7Z401 1863 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 ATG2AQ2TAZ0 1938 aa21.25■□□□□ 0.99
CCM2-206ENST00000474617 PRORSD1PA6NEY8 169 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 AQP12BA6NM10 295 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 LOC730098B7Z3J9 87 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 AP1G1O43747 822 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 SORBS2O94875 1100 aaKnown RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 PRPS2P11908 318 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 PSMC3P17980 439 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 MAGEA10P43363 369 aaPredicted RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 EEFSECP57772 596 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms