RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PER3P56645 1201 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 DLG4P78352 724 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ALCAMQ13740 583 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TFDP1Q14186 410 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MESDQ14696 234 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SLC15A2Q16348 729 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 GSTA3Q16772 222 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CCNYL2Q5T2Q4 361 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MARC1Q5VT66 337 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MRNIPQ6NTE8 343 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 EFCAB12Q6NXP0 572 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 GK5Q6ZS86 529 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SPATA19Q7Z5L4 167 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MICU2Q8IYU8 434 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 LRRC17Q8N6Y2 441 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 OR6Q1Q8NGQ2 317 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 OR5H6Q8NGV6 325 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 BAHD1Q8TBE0 780 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 HPS1Q92902 700 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CAVIN3Q969G5 261 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TMEM143Q96AN5 459 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MVB12AQ96EY5 273 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 NEIL1Q96FI4 390 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 PIMREGQ9BSJ6 248 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 HINT2Q9BX68 163 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ANO3Q9BYT9 981 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 C12orf65Q9H3J6 166 aaKnown RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 MUC13Q9H3R2 512 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 USP29Q9HBJ7 922 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PLGRKTQ9HBL7 147 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 RXFP1Q9HBX9 757 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CCNB1IP1Q9NPC3 277 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MAN2C1Q9NTJ4 1040 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MYEF2Q9P2K5 600 aaKnown RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 NEU2Q9Y3R4 380 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 NUBP2Q9Y5Y2 271 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 KIAA0232Q92628 1395 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 A0A0A6YYC8 382 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 I3L1I5 382 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 PSMD3O43242 534 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 APOL3O95236 402 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CH25HO95992 272 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CCNB1P14635 433 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 EFNA1P20827 205 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 KCNA3P22001 575 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 S100PP25815 95 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CDK7P50613 346 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PGDP52209 483 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 IRF8Q02556 426 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SLAMF1Q13291 335 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ENPP2Q13822 863 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 UAP1Q16222 522 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 STX1AQ16623 288 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SYT16Q17RD7 645 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SOWAHAQ2M3V2 549 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TRIM16LQ309B1 348 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SLC36A3Q495N2 470 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 DDI2Q5TDH0 399 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 KRT39Q6A163 491 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 OVOS1Q6IE37 1185 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PAQR3Q6TCH7 311 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PGAP1Q75T13 922 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 CYB5R4Q7L1T6 521 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 KCTD9Q7L273 389 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 RTN4RL1Q86UN2 441 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 CDAN1Q8IWY9 1227 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MEIOBQ8N635 442 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MCUQ8NE86 351 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 OR4K14Q8NGD5 310 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MAGEE2Q8TD90 523 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 RLN3Q8WXF3 142 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 C22orf15Q8WYQ4 148 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 RAB1CQ92928 201 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SLAMF9Q96A28 289 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 COA7Q96BR5 231 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SUSD3Q96L08 255 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 FOPNLQ96NB1 174 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SNX18Q96RF0 628 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TUBGCP2Q9BSJ2 902 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 P2RY12Q9H244 342 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 GAL3ST2Q9H3Q3 398 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ZCCHC4Q9H5U6 513 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 GIMAP4Q9NUV9 329 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PRMT7Q9NVM4 692 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 TEX10Q9NXF1 929 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 NDE1Q9NXR1 346 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 PISDQ9UG56 409 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ACSL5Q9ULC5 683 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TESMINQ9Y4I5 508 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TNFRSF18Q9Y5U5 241 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 MYH7P12883 1935 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SMIM31A0A1B0GVY4 71 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TRBC2A0A5B9 178 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ANKRD61A6NGH8 418 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 DUXAA6NLW8 204 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TEX46H3BTG2 121 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ARPC5O15511 151 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TBX1O43435 398 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms