RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FLT4P35916 1363 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC9B1P1A6NJY1 282 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 HACD1B0YJ81 288 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TRIM49D1C9J1S8 452 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LOC110117498-PIK3R3F6TDL0 507 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 H0Y626 953 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 STMND1H3BQB6 276 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NIPSNAP2O75323 286 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TADA2AO75478 443 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 APOL3O95236 402 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RASAL1O95294 804 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SUPT20HL2P0C7V6 817 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 IL15P40933 162 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KIR2DL1P43626 348 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KIR2DL2P43627 348 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 YAP1P46937 504 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 AKR1D1P51857 326 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PSMD4P55036 377 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CSNK2BP67870 215 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF91Q05481 1191 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 BTN1A1Q13410 526 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 DMC1Q14565 340 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MSMPQ1L6U9 139 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 STXBP5Q5T5C0 1151 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LGSNQ5TDP6 509 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 UTS2BQ765I0 119 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PAGE2Q7Z2X7 111 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 COMMD7Q86VX2 200 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ERO1BQ86YB8 467 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MAPKAPK5Q8IW41 473 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CBR4Q8N4T8 237 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TMEM199Q8N511 208 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FAM71DQ8N9W8 422 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MCFD2Q8NI22 146 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CYGBQ8WWM9 190 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 STON2Q8WXE9 905 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ASB12Q8WXK4 309 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC5A5Q92911 643 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RBM18Q96H35 190 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SERAC1Q96JX3 654 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CCDC32Q9BV29 185 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KATNAL1Q9BW62 490 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TINAGL1Q9GZM7 467 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLIRPQ9GZT3 109 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LMAN2LQ9H0V9 348 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SPNS1Q9H2V7 528 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PDZD7Q9H5P4 517 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RANBP3Q9H6Z4 567 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NOL11Q9H8H0 719 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 WDR41Q9HAD4 459 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NMUR1Q9HB89 426 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZIM2Q9NZV7 527 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 EXTL2Q9UBQ6 330 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CNOT6Q9ULM6 557 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 INVSQ9Y283 1065 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NDUFAF1Q9Y375 327 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ASB4Q9Y574 426 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FKBP7Q9Y680 259 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC12A8A0AV02 714 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PMS2P1A4D2B8 440 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 MYMKA6NI61 221 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 NT5C1B-RDH14C9J2C7 533 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 C22orf46C9J442 243 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 EEF2KO00418 725 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 AIM2O14862 343 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 NUPL2O15504 423 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 DCXO43602 365 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 AVILO75366 819 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 UGT2B17O75795 530 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RHOBTB1O94844 696 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 MED26O95402 600 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 APBB3O95704 486 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PCCAP05165 728 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 INHBAP08476 426 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CYP2C8P10632 490 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 IL1R1P14778 569 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RPL35P42766 123 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 HK3P52790 923 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 UGT2B15P54855 530 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ERVFC1P60507 584 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 YWHAEP62258 255 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ERVK-8P63133 956 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ALDH6A1Q02252 535 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CREMQ03060 361 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SPIRE1Q08AE8 756 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ACOX1Q15067 660 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ATP6AP1Q15904 470 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 HSD17B12Q53GQ0 312 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CLLU1Q5K131 121 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TIGD7Q6NT04 549 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 LIPIQ6XZB0 460 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RRM2BQ7LG56 351 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SPRED1Q7Z699 444 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF366Q8N895 744 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms