RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 NAT8LQ8N9F0 302 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 OR2T12Q8NG77 320 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 HCAR2Q8TDS4 363 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 ZDHHC12Q96GR4 267 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
IRF1-208ENST00000472045 ZNF487B1APH4 448 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 MAPK10P53779 464 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 C1orf61Q13536 156 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 QPCTQ16769 361 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 PTCRAQ6ISU1 281 aaPredicted RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SLC36A4Q6YBV0 504 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 FGD2Q7Z6J4 655 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 COX18Q8N8Q8 333 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 VANGL1Q8TAA9 524 aaPredicted RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 TAPBPLQ9BX59 468 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 EPS8L2Q9H6S3 715 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 IGLON5A6NGN9 336 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 OR5K4A6NMS3 321 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SAP18O00422 153 aaKnown RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 OR6B1O95007 311 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 IL6P05231 212 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 CD70P32970 193 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SOX6P35712 828 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 PTPN5P54829 565 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TMEM154Q6P9G4 183 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 LRRC70Q7Z2Q7 622 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 APCDD1Q8J025 514 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 RPLP0P6Q8NHW5 317 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 RIT1Q92963 219 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SCAMP4Q969E2 229 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 RGMAQ96B86 450 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TEFMQ96QE5 360 aaKnown RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 SEMA6AQ9H2E6 1030 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 MAGEE1Q9HCI5 957 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 CALML5Q9NZT1 146 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 A8MUA0 341 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 DCLK1O15075 740 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 MID1O15344 667 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 NRP2O60462 931 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 UGT2B17O75795 530 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ARSAP15289 507 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 AQP1P29972 269 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 GSTM5P46439 218 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 PTSQ03393 145 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TNK2Q07912 1038 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 KIAA1161Q6NSJ0 714 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ERICH5Q6P6B1 374 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 CLSTN3Q9BQT9 956 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 CCDC28BQ9BUN5 200 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 NLE1Q9NVX2 485 aaPredicted RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 PRKCHP24723 683 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SHMT2P34897 504 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 CXCL12P48061 93 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 C16orf72Q14CZ0 275 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ALYREFQ86V81 257 aaKnown RBP12.03□□□□□ -0.48
IRF1-208ENST00000472045 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TRAM1L1Q8N609 369 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 HRASLS2Q9NWW9 162 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 ADGRE2Q9UHX3 823 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 SCML1Q9UN30 329 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 AP4S1Q9Y587 144 aa12.03□□□□□ -0.48
IRF1-208ENST00000472045 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 PRR5-ARHGAP8B1AHC4 643 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 POLR2CP19387 275 aaPredicted RBP12.02□□□□□ -0.48
IRF1-208ENST00000472045 RGS8P57771 180 aaPredicted RBP12.02□□□□□ -0.48
IRF1-208ENST00000472045 PUS10Q3MIT2 529 aaKnown RBP12.02□□□□□ -0.48
IRF1-208ENST00000472045 PEX5LQ8IYB4 626 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 SVOPQ8N4V2 548 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 DHRSXQ8N5I4 330 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 ZSCAN1Q8NBB4 408 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 TEX47Q8TBZ9 253 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 GLYATL1Q969I3 302 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 DGAT2Q96PD7 388 aa12.02□□□□□ -0.48
IRF1-208ENST00000472045 SAMHD1Q9Y3Z3 626 aaKnown RBP12.02□□□□□ -0.48
IRF1-208ENST00000472045 PCDH7O60245 1069 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 EDF1O60869 148 aaKnown RBP12.02□□□□□ -0.49
IRF1-208ENST00000472045 OAS1P00973 400 aaKnown RBP12.02□□□□□ -0.49
IRF1-208ENST00000472045 PSMB9P28065 219 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 RYKP34925 604 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.49
IRF1-208ENST00000472045 NFKB2Q00653 900 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
IRF1-208ENST00000472045 RNF43Q68DV7 783 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 SLC8B1Q6J4K2 584 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 GK5Q6ZS86 529 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 GPR141Q7Z602 305 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 RABEPKQ7Z6M1 372 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 PPM1MQ96MI6 270 aa12.02□□□□□ -0.49
IRF1-208ENST00000472045 KCNS3Q9BQ31 491 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms