RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CCM2Q9BSQ5 444 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 TFB2MQ9H5Q4 396 aaKnown RBP18.34■□□□□ 0.53
SORT1-203ENST00000471996 TXLNGQ9NUQ3 528 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 ACTR10Q9NZ32 417 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 SVILO95425 2214 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 MYO1FO00160 1098 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 CCL21O00585 134 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 SOCS6O14544 535 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 ZSCAN9O15535 394 aaPredicted RBP18.33■□□□□ 0.52
SORT1-203ENST00000471996 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.52
SORT1-203ENST00000471996 DIAPH2O60879 1101 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 PMPCBO75439 489 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
SORT1-203ENST00000471996 GABRA4P48169 554 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 KLHL30Q0D2K2 578 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 NOMO1Q15155 1222 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 DEFB110Q30KQ9 67 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 BCL7AQ4VC05 210 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 ISLR2Q6UXK2 745 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 GFRALQ6UXV0 394 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 ZNF655Q8N720 491 aaPredicted RBP18.33■□□□□ 0.52
SORT1-203ENST00000471996 OR1N1Q8NGS0 311 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 NAT14Q8WUY8 206 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.52
SORT1-203ENST00000471996 MAGEB10Q96LZ2 347 aaPredicted RBP18.33■□□□□ 0.52
SORT1-203ENST00000471996 LMF1Q96S06 567 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 CHRNA10Q9GZZ6 450 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 THAP2Q9H0W7 228 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 SLC22A11Q9NSA0 550 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 CDC23Q9UJX2 597 aa18.33■□□□□ 0.52
SORT1-203ENST00000471996 FER1L5A0AVI2 2057 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 KCNN4O15554 427 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 CTSBP07858 339 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 MFAP5Q13361 173 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 ZIC1Q15915 447 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 TLDC1Q6P9B6 456 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 SPESP1Q6UW49 350 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 KIRREL2Q6UWL6 708 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 LINC00696Q6ZRV3 163 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 DAAM2Q86T65 1068 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 AMIGO1Q86WK6 493 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 ADGRF3Q8IZF5 1079 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 OR52E1Q8NGJ3 308 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
SORT1-203ENST00000471996 TAAR6Q96RI8 345 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 GLOD4Q9HC38 313 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 MYO7BQ6PIF6 2116 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 PCM1Q15154 2024 aa18.32■□□□□ 0.52
SORT1-203ENST00000471996 DNHD1Q96M86 4753 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 LOC285095A0A1B0GVY8 99 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 SGTAO43765 313 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 SKILP12757 684 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 CA7P43166 264 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 XKRXQ6PP77 449 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 SARM1Q6SZW1 724 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 TMEM207Q6UWW9 146 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 CDH24Q86UP0 819 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 HOOK3Q86VS8 718 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 CPNE8Q86YQ8 564 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 PLD5Q8N7P1 536 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 ZNF398Q8TD17 642 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 CPLX3Q8WVH0 158 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 THOC3Q96J01 351 aaKnown RBP18.31■□□□□ 0.52
SORT1-203ENST00000471996 RNF157Q96PX1 679 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 UBP1Q9NZI7 540 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 HACD3Q9P035 362 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 HEY1Q9Y5J3 304 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 HS3ST3B1Q9Y662 390 aa18.31■□□□□ 0.52
SORT1-203ENST00000471996 BUD23O43709 281 aaKnown RBP18.3■□□□□ 0.52
SORT1-203ENST00000471996 KLHL18O94889 574 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 CYP1A2P05177 515 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 INAQ16352 499 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.3■□□□□ 0.52
SORT1-203ENST00000471996 SIRPB2Q5JXA9 342 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 GLT6D1Q7Z4J2 308 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 TRIM73Q86UV7 250 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 HM13Q8TCT9 377 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 FKBP10Q96AY3 582 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 NDC1Q9BTX1 674 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 XKR8Q9H6D3 395 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 WDR54Q9H977 334 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 PKP3Q9Y446 797 aa18.3■□□□□ 0.52
SORT1-203ENST00000471996 CCDC88CQ9P219 2028 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
SORT1-203ENST00000471996 EPOP01588 193 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 PBX1P40424 430 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 TAS2R40P59535 323 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 MYL5Q02045 173 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 Q0VFX4 171 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 PDK1Q15118 436 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 TUBB8Q3ZCM7 444 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 TEX44Q53QW1 395 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 OVCH1Q7RTY7 1134 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 SLC25A41Q8N5S1 370 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 PHC3Q8NDX5 983 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 BLOC1S5Q8TDH9 187 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 C14orf79Q96F83 325 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 SPSB2Q99619 263 aa18.29■□□□□ 0.52
SORT1-203ENST00000471996 OR52A5Q9H2C5 316 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms