RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SIKE1Q9BRV8 207 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 HERC2P3Q9BVR0 1158 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 COMMD4Q9H0A8 199 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SLC39A1Q9NY26 324 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CCRL2O00421 344 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 FARS2O95363 451 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 PTPN5P54829 565 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 NIPAL1Q6NVV3 410 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 XYLT1Q86Y38 959 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 ACTRT1Q8TDG2 376 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PLAGL2Q9UPG8 496 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 BACE2Q9Y5Z0 518 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 GRXCR1A8MXD5 290 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 MATN3O15232 486 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 BDKRB1P46663 353 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DLG1Q12959 904 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DEFB133Q30KQ1 61 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TMEM198Q66K66 360 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 C22orf39Q6P5X5 142 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 ZIM3Q96PE6 472 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 YIPF4Q9BSR8 244 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DUSP23Q9BVJ7 150 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 GBA3Q9H227 469 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PRTFDC1Q9NRG1 225 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PPP4R1LQ9P1A2 415 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 EFR3BQ9Y2G0 817 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TMEM131LA2VDJ0 1609 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 AZIN1O14977 448 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 MNDAP41218 407 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DAOAP59103 153 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 GPR68Q15743 365 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PDK4Q16654 411 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 KLHL17Q6TDP4 642 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PHF13Q86YI8 300 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 OR2AP1Q8NGE2 309 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TCP10LQ8TDR4 215 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SEC16BQ96JE7 1060 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CMKLR1Q99788 373 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 TMEM79Q9BSE2 394 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DCUN1D5Q9BTE7 237 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PLGRKTQ9HBL7 147 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 ARL5AQ9Y689 179 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 RGSL1A5PLK6 1076 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SHISA7A6NL88 538 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PTGES3LE9PB15 166 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 UBTFL6P0CB48 400 aaPredicted RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 NR2C1P13056 603 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SDHBP21912 280 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 ENPEPQ07075 957 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 EXOC3L2Q2M3D2 409 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 PITRM1Q5JRX3 1037 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 KYAT3Q6YP21 454 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 NOL11Q9H8H0 719 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 Q9N2J8 555 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 DIABLOQ9NR28 239 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 CENPMQ9NSP4 180 aa8.43□□□□□ -1.06
CD47-204ENST00000471694 SAMD4AQ9UPU9 718 aaKnown RBP8.43□□□□□ -1.06
CD47-204ENST00000471694 MTMR11A4FU01 709 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 SEC14L5O43304 696 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 TPST2O60704 377 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PGLSO95336 258 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CCND1P24385 295 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 LCN1P1Q5VSP4 162 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SULT1C3Q6IMI6 304 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 UNQ6126/PRO20091Q6UXV3 157 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 TMC3Q7Z5M5 1100 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PIGXQ8TBF5 258 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SLC47A1Q96FL8 570 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 MPP4Q96JB8 637 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 MCUBQ9NWR8 336 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 POFUT2Q9Y2G5 429 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 hCG_1807616A0A1W2PRN6 198 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
CD47-204ENST00000471694 OR5K4A6NMS3 321 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 A8MVJ9 347 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 TTC34A8MYJ7 566 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 BMP4P12644 408 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 MPSTP25325 297 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PCBP2Q15366 365 aaKnown RBP eCLIP8.42□□□□□ -1.06
CD47-204ENST00000471694 TAF5Q15542 800 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 ZACNQ401N2 412 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 BICRALQ6AI39 1079 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 PTCHD4Q6ZW05 846 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 TBATAQ96M53 351 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 EPYCQ99645 322 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 TWSG1Q9GZX9 223 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 SLC25A51Q9H1U9 297 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 IFT46Q9NQC8 304 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 HPF1Q9NWY4 346 aa8.42□□□□□ -1.06
CD47-204ENST00000471694 DNAJB4Q9UDY4 337 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms