RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 BAHD1Q8TBE0 780 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 SLC37A2Q8TED4 501 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 OR4K3Q96R72 315 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 C1QTNF3Q9BXJ4 246 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 PITPNM3Q9BZ71 974 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 KCNH6Q9H252 994 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ALG9Q9H6U8 611 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 SYTL2Q9HCH5 934 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ZBTB26Q9HCK0 441 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 SLC40A1Q9NP59 571 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ACSS2Q9NR19 701 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 DNAJC28Q9NX36 388 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 XPR1Q9UBH6 696 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ACSL5Q9ULC5 683 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 OARD1Q9Y530 152 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 CABIN1Q9Y6J0 2220 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 A8MT66 165 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 H3BM21 787 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 UBXN8O00124 270 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 UBFD1O14562 309 aaKnown RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TM4SF5O14894 197 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 KPNA5O15131 536 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 SLC16A5O15375 505 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 AQP9O43315 295 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 OPA1O60313 960 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 PCDHGA12O60330 932 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 KERAO60938 352 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 APOA4P06727 396 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 FGF3P11487 239 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 MTHFD1P11586 935 aaKnown RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 F3P13726 295 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 IMPA1P29218 277 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ALDH3A1P30838 453 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ACTR1BP42025 376 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CCR10P46092 362 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ACTR1AP61163 376 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ATP6V0D1P61421 351 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CDKL1Q00532 357 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 NFKB2Q00653 900 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 IL9RQ01113 521 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 GTF2H3Q13889 308 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TGFBIQ15582 683 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CYP2A13Q16696 494 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 PROX2Q3B8N5 592 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 UNC50Q53HI1 259 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 FBXO48Q5FWF7 155 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 RPS27LQ71UM5 84 aaKnown RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CCDC91Q7Z6B0 441 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CROCCP2Q86T23 111 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 SLC35F3Q8IY50 421 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 OR56A3Q8NH54 315 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 OR5K2Q8NHB8 316 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 GABPB2Q8TAK5 448 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CEP76Q8TAP6 659 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 LMX1AQ8TE12 382 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF480Q8WV37 535 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TFGQ92734 400 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ESAMQ96AP7 390 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 RHBDF1Q96CC6 855 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TSPAN17Q96FV3 270 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 PRR11Q96HE9 360 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CABS1Q96KC9 395 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 IL17FQ96PD4 163 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 FAM111AQ96PZ2 611 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 MECRQ9BV79 373 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 GAREM1Q9H706 876 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 NMRAL1Q9HBL8 299 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 SENP1Q9P0U3 644 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TXNDC16Q9P2K2 825 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 COPG2Q9UBF2 871 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 FAM8A1Q9UBU6 413 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 CIDEBQ9UHD4 219 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 DCDC2Q9UHG0 476 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
SF3A1-207ENST00000471342 ICKQ9UPZ9 632 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 SH2B3Q9UQQ2 575 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 IKBKGQ9Y6K9 419 aa9.62□□□□□ -0.87
SF3A1-207ENST00000471342 TRBV23OR9-2A0A075B6M9 112 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 IGKV1-8A0A0C4DH67 115 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 E5RI56 91 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 E7ENX8 843 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 BTN3A1O00481 513 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 E2F3O00716 465 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PFDN6O15212 129 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 B4GAT1O43505 415 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 GDF9O60383 454 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 GLRA3O75311 464 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 SIX3O95343 332 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 SLC16A8O95907 504 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 BPGMP07738 259 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF883P0CG24 379 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 IDSP22304 550 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 FASLGP48023 281 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 LSSP48449 732 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PRKAA2P54646 552 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 GYS2P54840 703 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 HNRNPKP61978 463 aaKnown RBP eCLIP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms