RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 WDR55Q9H6Y2 383 aaPredicted RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 NOL11Q9H8H0 719 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LTB4R2Q9NPC1 389 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 ITM2CQ9NQX7 267 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 FAM8A1Q9UBU6 413 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 WNT16Q9UBV4 365 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 CA14Q9ULX7 337 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 SLC17A4Q9Y2C5 497 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 TMEM98Q9Y2Y6 226 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 FIS1Q9Y3D6 152 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 DNAJC15Q9Y5T4 150 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 ST14Q9Y5Y6 855 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 A0A1B0GTL3 188 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ARHGEF33A8MVX0 844 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ANKRD65E5RJM6 399 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CACNB4O00305 520 aaPredicted RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 KMOO15229 486 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CCNT2O60583 730 aaKnown RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 VPS4BO75351 444 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CRCPO75575 148 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 STK16O75716 305 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CBX6O95503 412 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ENO1P06733 434 aaKnown RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 HOXC4P09017 264 aaPredicted RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 T-ENOLP0DO92 83 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 EPB42P16452 691 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CALB2P22676 271 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ADSLP30566 484 aaPredicted RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 MAT2AP31153 395 aaKnown RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 ACSL1P33121 698 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 FOXA1P55317 472 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 STARD6P59095 220 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 KIAA1024LP59773 190 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 TFF2Q03403 129 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 DMPKQ09013 629 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 TRAF3Q13114 568 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 PLA2G4EQ3MJ16 856 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 RNF165Q6ZSG1 346 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ASRGL1Q7L266 308 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 PDZD3Q86UT5 571 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 FAM124AQ86V42 546 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 AMZ2Q86W34 360 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CFAP206Q8IYR0 622 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CPSF7Q8N684 471 aaKnown RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 TEX9Q8N6V9 391 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 OR52B6Q8NGF0 335 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CEP70Q8NHQ1 597 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 HMGB4Q8WW32 186 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ATL1Q8WXF7 558 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 KLK6Q92876 244 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CCDC138Q96M89 665 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 KCNA7Q96RP8 456 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CCT7Q99832 543 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 TIMM29Q9BSF4 260 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 APOOQ9BUR5 198 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 OR52A5Q9H2C5 316 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 IPPKQ9H8X2 491 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 CD93Q9NPY3 652 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 PFDN4Q9NQP4 134 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ARL8BQ9NVJ2 186 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 TRPS1Q9UHF7 1281 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ZNF225Q9UK10 706 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 OR1A2Q9Y585 309 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 ANGPTL3Q9Y5C1 460 aa9.16□□□□□ -0.94
VPS52-216ENST00000471309 PCYT1BQ9Y5K3 369 aaPredicted RBP9.16□□□□□ -0.94
VPS52-216ENST00000471309 TRPM6Q9BX84 2022 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 KRBA1A5PL33 1030 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 CFAP73A6NFT4 308 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PRR5-ARHGAP8B1AHC4 643 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 MYO1CO00159 1063 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 FPGTO14772 594 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PIP5K1BO14986 540 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 LATO43561 262 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 DCXO43602 365 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 OR4F21O95013 312 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 SEMA4FO95754 770 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 EBLN1P0CF75 366 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 NCF2P19878 526 aaPredicted RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 HNRNPA2B1P22626 353 aaKnown RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 ACADLP28330 430 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PDHA2P29803 388 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PRDX6P30041 224 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PRDX3P30048 256 aaKnown RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 OXTRP30559 389 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 GDF5P43026 501 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 BDKRB1P46663 353 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 RASSF2P50749 326 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 CCNG1P51959 295 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 ERVPABLB-1P60509 514 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 IRX1P78414 480 aaPredicted RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 ABRQ12979 859 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 NFE2L1Q14494 772 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms