RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	KRT6C	P48668	564 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	HSPA7	P48741	367 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	CTSC	P53634	463 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TAS2R38	P59533	333 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	CDK3	Q00526	305 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	PCDH1	Q08174	1060 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TDG	Q13569	410 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	UBAP2L	Q14157	1087 aa	Known RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	SMAD2	Q15796	467 aa	Known RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KHDC1	Q4VXA5	237 aa	Known RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	C10orf62	Q5T681	223 aa	Predicted RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	CLEC6A	Q6EIG7	209 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	C16orf89	Q6UX73	402 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	UNC5D	Q6UXZ4	953 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	SYVN1	Q86TM6	617 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	LRRTM4	Q86VH4	590 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	HORMAD1	Q86X24	394 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TREML1	Q86YW5	311 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	KLHDC8A	Q8IYD2	350 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	FAM9C	Q8IZT9	166 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	BEND7	Q8N7W2	519 aa	Predicted RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	OR14C36	Q8NHC7	312 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	METTL6	Q8TCB7	284 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	FAM3C	Q92520	227 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TUBGCP3	Q96CW5	907 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	MOCOS	Q96EN8	888 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	PPP3R2	Q96LZ3	170 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	NSUN5	Q96P11	429 aa	Known RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	LENG8	Q96PV6	779 aa	Predicted RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	OR2AG1	Q9H205	316 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	WDR26	Q9H7D7	661 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	ITM2C	Q9NQX7	267 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	HEBP1	Q9NRV9	189 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	TAS2R1	Q9NYW7	299 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	ATXN10	Q9UBB4	475 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	MMP17	Q9ULZ9	603 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	SNX6	Q9UNH7	406 aa		10.74	□□□□□ -0.69
SND1-208	ENST00000470463	MRPS17	Q9Y2R5	130 aa	Known RBP	10.74	□□□□□ -0.69
SND1-208	ENST00000470463	PIKFYVE	Q9Y2I7	2098 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463		A0A1W2PQF6	199 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	LRRC14B	A6NHZ5	514 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	LRRC72	A6NJI9	287 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	BBIP1	A8MTZ0	92 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	TMEM233	B4DJY2	109 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	PLK4	O00444	970 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	PIP5K1B	O14986	540 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	GSC2	O15499	205 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	RGS14	O43566	566 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	MGRN1	O60291	552 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	LILRB5	O75023	590 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ADAM23	O75077	832 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	WFS1	O76024	890 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CLDN9	O95484	217 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	MYCLP1	P12525	358 aa	Predicted RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	KEL	P23276	732 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CCND1	P24385	295 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	PIK3R1	P27986	724 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	NUDT1	P36639	197 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	PNLIPRP1	P54315	467 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ADPRH	P54922	357 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	KCNJ2	P63252	427 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ELF3	P78545	371 aa	Predicted RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	NHLH1	Q02575	133 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	LRRC32	Q14392	662 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	WSCD2	Q2TBF2	565 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ZNF658B	Q4V348	819 aa	Predicted RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	TMEM259	Q4ZIN3	620 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ATP6AP1L	Q52LC2	224 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	SLC44A4	Q53GD3	710 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	XKR7	Q5GH72	579 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	WASHC2D	Q5SRD0	308 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CYB5D1	Q6P9G0	228 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ZNF852	Q6ZMS4	543 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	LPCAT2	Q7L5N7	544 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	AMZ2	Q86W34	360 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	HEATR4	Q86WZ0	1026 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	OXR1	Q8N573	874 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	OR4F6	Q8NGB9	312 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CFAP61	Q8NHU2	1237 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	DLG3	Q92796	817 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	EZH1	Q92800	747 aa	Predicted RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	SERPINI1	Q99574	410 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	TMEM79	Q9BSE2	394 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	SLC25A23	Q9BV35	468 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	SLC17A9	Q9BYT1	436 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	MKRN2	Q9H000	416 aa	Known RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	EFCAB1	Q9HAE3	211 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	SGK2	Q9HBY8	427 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	POLM	Q9NP87	494 aa	Predicted RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ACSS2	Q9NR19	701 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	DNAJC11	Q9NVH1	559 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	GPRC5B	Q9NZH0	403 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	POLG2	Q9UHN1	485 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	PRDM4	Q9UKN5	801 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	ACSL5	Q9ULC5	683 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	COPG1	Q9Y678	874 aa	Known RBP	10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CHD9	Q3L8U1	2897 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	CHD7	Q9P2D1	2997 aa		10.73	□□□□□ -0.69
SND1-208	ENST00000470463	TBC1D3D	A0A087WVF3	549 aa		10.72	□□□□□ -0.69
SND1-208	ENST00000470463	TBC1D3I	A0A087WXS9	549 aa		10.72	□□□□□ -0.69

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