RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PCED1AQ9H1Q7 454 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 P2RY12Q9H244 342 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 SEMA6CQ9H3T2 930 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 FAM96AQ9H5X1 160 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 CCDC134Q9H6E4 229 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 ITM2CQ9NQX7 267 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 PHPT1Q9NRX4 125 aaPredicted RBP6.53□□□□□ -1.36
VAMP3-202ENST00000470357 SPATS2LQ9NUQ6 558 aaKnown RBP6.53□□□□□ -1.36
VAMP3-202ENST00000470357 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
VAMP3-202ENST00000470357 ADAM21Q9UKJ8 722 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 TMCO1Q9UM00 188 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 WASF3Q9UPY6 502 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 ITM2BQ9Y287 266 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
VAMP3-202ENST00000470357 SDK1Q7Z5N4 2213 aa6.53□□□□□ -1.36
VAMP3-202ENST00000470357 LOC400499M0QZD8 3231 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3DA0A087WVF3 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3IA0A087WXS9 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3EA0A087X179 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3KA0A087X1G2 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 A0A0U1RQS6 177 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3FA6NER0 549 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 IGLON5A6NGN9 336 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SYCE1LA8MT33 242 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3LB9A6J9 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 K7ESF4 209 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 PLK4O00444 970 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 RNGTTO60942 597 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SNUPNO95149 360 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SEMA4FO95754 770 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TGFB1P01137 390 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3HP0C7X1 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 NEFHP12036 1026 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ENO3P13929 434 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ATP1B2P14415 290 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CHN1P15882 459 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ZNF37AP17032 561 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UGT1A6P19224 532 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TAC1P20366 129 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UGT1A1P22309 533 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UGT1A4P22310 534 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 DGKAP23743 735 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ADMP35318 185 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UGT1A3P35503 534 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UGT1A5P35504 534 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ABCG1P45844 678 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CDKN1CP49918 316 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TPMTP51580 245 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CCR5P51681 352 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 NAA20P61599 178 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 PLOD1Q02809 727 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 MAP7Q14244 749 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ACAP2Q15057 778 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ZNF789Q5FWF6 425 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 RBM20Q5T481 1227 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3GQ6DHY5 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3CQ6IPX1 549 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ZNF549Q6P9A3 640 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 LVRNQ6Q4G3 990 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 Q6ZS52 159 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 OTOAQ7RTW8 1153 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CMC1Q7Z7K0 106 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CACUL1Q86Y37 369 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TBC1D3Q8IZP1 549 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CCDC63Q8NA47 563 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 RHEBL1Q8TAI7 183 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 RAB3IL1Q8TBN0 382 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 DENND1AQ8TEH3 1009 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ASZ1Q8WWH4 475 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 INPP5DQ92835 1189 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 PDLIM5Q96HC4 596 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 UBXN10Q96LJ8 280 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 LENG8Q96PV6 779 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 FAM111AQ96PZ2 611 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 NDNQ99608 321 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 KLF6Q99612 283 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 MRPL57Q9BQC6 102 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 SLC17A9Q9BYT1 436 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 DERL2Q9GZP9 239 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 NSRP1Q9H0G5 558 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 MRPL46Q9H2W6 279 aaKnown RBP6.52□□□□□ -1.37
VAMP3-202ENST00000470357 RMI1Q9H9A7 625 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 TRIM39Q9HCM9 518 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 C2orf42Q9NWW7 574 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 PSD3Q9NYI0 1048 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 CD84Q9UIB8 345 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 DMTF1Q9Y222 760 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 DHRS7Q9Y394 339 aa6.52□□□□□ -1.37
VAMP3-202ENST00000470357 ZFC3H1O60293 1989 aaKnown RBP6.51□□□□□ -1.37
VAMP3-202ENST00000470357 FREM2Q5SZK8 3169 aa6.51□□□□□ -1.37
VAMP3-202ENST00000470357 CELSR3Q9NYQ7 3312 aa6.51□□□□□ -1.37
VAMP3-202ENST00000470357 C17orf113A0A1B0GUU1 675 aa6.51□□□□□ -1.37
VAMP3-202ENST00000470357 PABPN1LA6NDY0 278 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms