RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SRFP11831 508 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 PIK3R1P27986 724 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 MAT2AP31153 395 aaKnown RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 AP1S2P56377 157 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 MXRA7P84157 204 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TRAF3Q13114 568 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3GQ6DHY5 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3CQ6IPX1 549 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 EFL1Q7Z2Z2 1120 aaKnown RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 TBC1D3Q8IZP1 549 aaPredicted RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 TCAIMQ8N3R3 496 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 CDX2Q99626 313 aaPredicted RBP17.72■□□□□ 0.43
SMC4-211ENST00000469858 WDR26Q9H7D7 661 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 AKTIPQ9H8T0 292 aa17.72■□□□□ 0.43
SMC4-211ENST00000469858 UBDO15205 165 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 EPB42P16452 691 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 BDKRB1P46663 353 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 HNMTP50135 292 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 ZXDCQ2QGD7 858 aaPredicted RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 TMEM259Q4ZIN3 620 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 TCHHL1Q5QJ38 904 aaPredicted RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 METTL2BQ6P1Q9 378 aaKnown RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 SCIMPQ6UWF3 145 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 CHSY3Q70JA7 882 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 RASGRP3Q8IV61 690 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 RBM15BQ8NDT2 890 aaKnown RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 TUBGCP3Q96CW5 907 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 LINC00615Q96LM1 132 aaPredicted RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 FOPNLQ96NB1 174 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 C1QTNF2Q9BXJ5 285 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 SLC17A9Q9BYT1 436 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 CD93Q9NPY3 652 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 GIMAP2Q9UG22 337 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 POLG2Q9UHN1 485 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 NCKAP1Q9Y2A7 1128 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 CATP04040 527 aaKnown RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 CAPN1P07384 714 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 COX4I1P13073 169 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 CD1EP15812 388 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 NDUFV2P19404 249 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 GGT5P36269 586 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 TDGQ13569 410 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 NFE2L1Q14494 772 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 FBXW10Q5XX13 1052 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 MILR1Q7Z6M3 343 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 HORMAD1Q86X24 394 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 METTL6Q8TCB7 284 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 HM13Q8TCT9 377 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 PYCR2Q96C36 320 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 MSANTD3Q96H12 275 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 TEX101Q9BY14 249 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 CADM1Q9BY67 442 aaKnown RBP17.71■□□□□ 0.43
SMC4-211ENST00000469858 SLC32A1Q9H598 525 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 FZD4Q9ULV1 537 aa17.71■□□□□ 0.43
SMC4-211ENST00000469858 TCRBV21S2A2A0A5A6 115 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 SLC22A2O15244 555 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 WDR47O94967 919 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PRDX6P30041 224 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 ELF3P78545 371 aaPredicted RBP17.7■□□□□ 0.42
SMC4-211ENST00000469858 PTCHD3Q3KNS1 767 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 LRRC70Q7Z2Q7 622 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 C11orf96Q7Z7L8 435 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 KBTBD6Q86V97 674 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 OR2L2Q8NH16 312 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PREBQ9HCU5 417 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 FZD3Q9NPG1 666 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 SLC2A4RGQ9NR83 387 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 CIDEBQ9UHD4 219 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 MMP17Q9ULZ9 603 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 C17orf113A0A1B0GUU1 675 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 MGAT4DA6NG13 374 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 CHUKO15111 745 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 FOSL2P15408 326 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 HMOX2P30519 316 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 ADSLP30566 484 aaPredicted RBP17.7■□□□□ 0.42
SMC4-211ENST00000469858 PIK3CGP48736 1102 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 MNAT1P51948 309 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PPP2CBP62714 309 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PPP2CAP67775 309 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 CDC16Q13042 620 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 CCSMST1Q4G0I0 132 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PTCRAQ6ISU1 281 aaPredicted RBP17.7■□□□□ 0.42
SMC4-211ENST00000469858 XKR5Q6UX68 686 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 USP30Q70CQ3 517 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 LRRTM4Q86VH4 590 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 SNX31Q8N9S9 440 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 MYOCQ99972 504 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 C1QTNF7Q9BXJ2 289 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 ATG10Q9H0Y0 220 aa17.7■□□□□ 0.42
SMC4-211ENST00000469858 PHPT1Q9NRX4 125 aaPredicted RBP17.7■□□□□ 0.42
SMC4-211ENST00000469858 GSC2O15499 205 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 RASSF9O75901 435 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 ALDOCP09972 364 aaKnown RBP17.69■□□□□ 0.42
SMC4-211ENST00000469858 HGFP14210 728 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 TRIM23P36406 574 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 MAPK9P45984 424 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 SLC6A12P48065 614 aa17.69■□□□□ 0.42
SMC4-211ENST00000469858 HTR6P50406 440 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms