RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 PAGE2BQ5JRK9 111 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 MORN1Q5T089 497 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 CPZQ66K79 652 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 OR7D4Q8NG98 312 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 PYCR2Q96C36 320 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 REXO5Q96IC2 774 aaKnown RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 RPRD1AQ96P16 312 aaPredicted RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 BPIFA1Q9NP55 256 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 HMG20AQ9NP66 347 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 PKP3Q9Y446 797 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 ELOVL7A1L3X0 281 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 E9PQ18 207 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 ZNF623O75123 536 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 CNOT3O75175 753 aaKnown RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 CREG1O75629 220 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 SERPINF2P08697 491 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 SLC6A4P31645 630 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 DAPP51397 102 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 IL2P60568 153 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 TAF1AQ15573 450 aaPredicted RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 INAQ16352 499 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 SYT6Q5T7P8 510 aaPredicted RBP10.09□□□□□ -0.79
SMC4-210ENST00000469762 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 GALNT5Q7Z7M9 940 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 ZNF555Q8NEP9 628 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 OR5K1Q8NHB7 308 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
SMC4-210ENST00000469762 H3BNC9 293 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 DNAJB5O75953 348 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 FTH1P02794 183 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 MAGEA2P43356 314 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 HMGCS1Q01581 520 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ILF2Q12905 390 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 DSC3Q14574 896 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 KCNJ8Q15842 424 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 SLC22A15Q8IZD6 547 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ZCCHC7Q8N3Z6 543 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 THUMPD3Q9BV44 507 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 WDR12Q9GZL7 423 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 NSUN3Q9H649 340 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 PRDM8Q9NQV8 689 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ATAD3AQ9NVI7 634 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMC4-210ENST00000469762 ZMYM5Q9UJ78 669 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ABCG2Q9UNQ0 655 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 SLC45A1Q9Y2W3 748 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CCL15-CCL14A0A0B4J2E2 113 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 IGHA2P01877 340 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ITGAMP11215 1152 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 PABPC1P11940 636 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 CD52P31358 61 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 MC4RP32245 332 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 GDF5P43026 501 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 RPL38P63173 70 aaKnown RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 TSPY1Q01534 308 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 TUSC3Q13454 348 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 GTF2H2Q13888 395 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ZNF235Q14590 738 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ACOX1Q15067 660 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 TRIP4Q15650 581 aaPredicted RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 CCL15Q16663 113 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 GTF2H2CQ6P1K8 395 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 PLEKHG7Q6ZR37 379 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 KCNJ9Q92806 393 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 SLC10A4Q96EP9 437 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CCDC138Q96M89 665 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CLMPQ9H6B4 373 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 ERVK-11Q9UQG0 969 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 A8MU76 341 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 NADKO95544 446 aaPredicted RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 SERPINA1P01009 418 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 PGRP06401 933 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 RETP07949 1114 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 EPS8Q12929 822 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CAPN13Q6MZZ7 669 aaPredicted RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 ZNF280BQ86YH2 543 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 MICU2Q8IYU8 434 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 OR7A2PQ8NGA2 310 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 LKAAEAR1Q8TD35 194 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 TRIB2Q92519 343 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 HPS1Q92902 700 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 MYOCQ99972 504 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 CPPED1Q9BRF8 314 aaPredicted RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 CCDC90BQ9GZT6 254 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 NECTIN3Q9NQS3 549 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 POU2F3Q9UKI9 436 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 PADI3Q9ULW8 664 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
SMC4-210ENST00000469762 GPC6Q9Y625 555 aaPredicted RBP10.08□□□□□ -0.8
SMC4-210ENST00000469762 BCKDKO14874 412 aa10.07□□□□□ -0.8
SMC4-210ENST00000469762 TSPAN3O60637 253 aa10.07□□□□□ -0.8
SMC4-210ENST00000469762 VPS26AO75436 327 aa10.07□□□□□ -0.8
SMC4-210ENST00000469762 OXSR1O95747 527 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms