RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SLC5A2P31639 672 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 HNRNPH3P31942 346 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PCK1P35558 622 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 GJC1P36383 396 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PLA2G5P39877 138 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PBX1P40424 430 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 CSKP41240 450 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 SLC1A1P43005 524 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 DNA2P51530 1060 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 ATXN3P54252 364 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TIRAPP58753 221 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 MRPS35P82673 323 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 ZBTB16Q05516 673 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 GFPT1Q06210 699 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF234Q14588 700 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 C15orf59Q2T9L4 293 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TUBB8Q3ZCM7 444 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PARP15Q460N3 678 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 CCDC14Q49A88 953 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FAM133BQ5BKY9 247 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PPP6R3Q5H9R7 873 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 WDR45BQ5MNZ6 344 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FAXCQ5TGI0 409 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF776Q68DI1 518 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 LAIR1Q6GTX8 287 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PLEKHA7Q6IQ23 1121 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 DPY19L2P1Q6NXN4 242 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 FBXL22Q6P050 247 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TMCO3Q6UWJ1 677 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 BZW1Q7L1Q6 419 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TFAP2DQ7Z6R9 452 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 KBTBD6Q86V97 674 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 LDLRAD3Q86YD5 345 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 SYCE1Q8N0S2 351 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 RYBPQ8N488 228 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 IL17RCQ8NAC3 791 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 HSPH1Q92598 858 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 NT5C3BQ969T7 300 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 R3HDM4Q96D70 268 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PIWIL1Q96J94 861 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PDLIM2Q96JY6 352 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PCDHB18PQ96TA0 734 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 BAG1Q99933 345 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 THAP2Q9H0W7 228 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 MAGEH1Q9H213 219 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 TOR3AQ9H497 397 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 THAP10Q9P2Z0 257 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 PCSK1NQ9UHG2 260 aa6.28□□□□□ -1.4
PTCD3-208ENST00000469585 DRG1Q9Y295 367 aaKnown RBP6.28□□□□□ -1.4
PTCD3-208ENST00000469585 A0A087X0T9 212 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 OR2W5A6NFC9 320 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 LRRC72A6NJI9 287 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 TMEM110-MUSTN1A8MSY1 372 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 KRT86O43790 486 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 COQ9O75208 318 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF189O75820 626 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NXPH3O95157 252 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ONECUT2O95948 504 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 CYP1A2P05177 515 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ELFN1P0C7U0 828 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 FAM228BP0C875 321 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NR2F6P10588 404 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 JUPP14923 745 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 PECAM1P16284 738 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 TYRP1P17643 537 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 CA4P22748 312 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 CTNNA2P26232 953 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 HLA-FP30511 346 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 HOXC13P31276 330 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NBL1P41271 181 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 GRIA3P42263 894 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 MAGEA1P43355 309 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 RENBPP51606 427 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 GALCP54803 685 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 YBEYP58557 167 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 SNRPD1P62314 119 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 RPL7AP62424 266 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NHLH1Q02575 133 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 GNA12Q03113 381 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 KIF5AQ12840 1032 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 LMAN2Q12907 356 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ELAVL3Q14576 367 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF169Q14929 603 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 PDK2Q15119 407 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 SLC45A4Q5BKX6 768 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 SPDYCQ5MJ68 293 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 TMTC4Q5T4D3 741 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ABLIM2Q6H8Q1 611 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NADSYN1Q6IA69 706 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ERAP2Q6P179 960 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 PGBD2Q6P3X8 592 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 USP51Q70EK9 711 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 CAND1Q86VP6 1230 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 LRRC49Q8IUZ0 686 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NDUFAF2Q8N183 169 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms