RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 HNRNPDQ14103 355 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 SNAPC1Q16533 368 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 KIAA1644Q3SXP7 199 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 BMP2KLQ5H9B9 411 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 DCAF10Q5QP82 559 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 ELFN2Q5R3F8 820 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 SPATA1Q5VX52 437 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 KRT79Q5XKE5 535 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 APLFQ8IW19 511 aaPredicted RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 CPSF7Q8N684 471 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 TMEM178AQ8NBL3 297 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 ADAD2Q8NCV1 583 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 RNF128Q8TEB7 428 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 TAF15Q92804 592 aaKnown RBP eCLIP2.9□□□□□ -1.95
TPR-204ENST00000469463 SLC22A18Q96BI1 424 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 NXNL1Q96CM4 212 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 MS4A10Q96PG2 267 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 SLC22A12Q96S37 553 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 ABHD1Q96SE0 405 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 URM1Q9BTM9 101 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 LMF2Q9BU23 707 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 NUP85Q9BW27 656 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 RBM4Q9BWF3 364 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 APOL6Q9BWW8 343 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 TMX4Q9H1E5 349 aaPredicted RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 PPIL3Q9H2H8 161 aaKnown RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 MMP27Q9H306 513 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 A4GALTQ9NPC4 353 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 CACNG4Q9UBN1 327 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 MAGED1Q9Y5V3 778 aaPredicted RBP2.9□□□□□ -1.95
TPR-204ENST00000469463 SNX8Q9Y5X2 465 aa2.9□□□□□ -1.95
TPR-204ENST00000469463 LOC102723996A0A087X1L8 192 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 GPR75-ASB3A0A0A6YYF3 556 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ANKUB1A6NFN9 424 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ERI2A8K979 691 aaKnown RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 ADAMDEC1O15204 470 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 CDC123O75794 336 aaPredicted RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 CLPTM1O96005 669 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ERVK-10P10266 1014 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 TRIM21P19474 475 aaKnown RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 ITGA3P26006 1051 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 PTPN3P26045 913 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 TAF6P49848 677 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 LIG4P49917 911 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 LBX1P52954 281 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 CDH13P55290 713 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 PMP22Q01453 160 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 CDR2Q01850 454 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 SP3Q02447 781 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 LGALS3BPQ08380 585 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 GRAPQ13588 217 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 NR1D2Q14995 579 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 PCLAFQ15004 111 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 LETM2Q2VYF4 491 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 TMEM30BQ3MIR4 351 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ZFP69Q49AA0 526 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 MDH1BQ5I0G3 518 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 C6orf163Q5TEZ5 329 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ARHGAP17Q68EM7 881 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 FAM53AQ6NSI3 398 aaPredicted RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 SLC16A9Q7RTY1 509 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 GUF1Q8N442 669 aaKnown RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 SPEM1Q8N4L4 309 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 RAB42Q8N4Z0 105 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 MINDY1Q8N5J2 469 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 TRIML1Q8N9V2 468 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 WDSUB1Q8N9V3 476 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 DDHD1Q8NEL9 900 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 HCAR2Q8TDS4 363 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 CCDC107Q8WV48 283 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 SUSD6Q92537 303 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ZNF622Q969S3 477 aaKnown RBP eCLIP2.89□□□□□ -1.953e-13■■■■□ 20
TPR-204ENST00000469463 LGALS12Q96DT0 336 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 ART5Q96L15 291 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 SGK494Q96LW2 274 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 SFXN2Q96NB2 322 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 NEK1Q96PY6 1258 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 LITAFQ99732 161 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 WDR13Q9H1Z4 485 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 GOLPH3LQ9H4A5 285 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 OPA3Q9H6K4 179 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 WSB2Q9NYS7 404 aaPredicted RBP2.89□□□□□ -1.95
TPR-204ENST00000469463 SLC24A2Q9UI40 661 aa2.89□□□□□ -1.95
TPR-204ENST00000469463 hCG_1809904A0A1W2PP81 198 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 A0A1W2PPE2 198 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 A0A1W2PR64 198 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 ANTXRLA6NF34 631 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 GLOD5A6NK44 160 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 PSMD14O00487 310 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 MED24O75448 989 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 EDN1P05305 212 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 TPOP07202 933 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 JAK1P23458 1154 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 MNDAP41218 407 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 RPL21P46778 160 aaKnown RBP2.88□□□□□ -1.95
TPR-204ENST00000469463 SLC9A3P48764 834 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 PNRC1Q12796 327 aaPredicted RBP2.88□□□□□ -1.95
TPR-204ENST00000469463 PPIGQ13427 754 aaKnown RBP eCLIP2.88□□□□□ -1.95
TPR-204ENST00000469463 GRTP1Q5TC63 336 aa2.88□□□□□ -1.95
TPR-204ENST00000469463 ENOSF1Q7L5Y1 443 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms