RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 C16orf82Q7Z2V1 217 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 CUZD1Q86UP6 607 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 TTC30BQ8N4P2 665 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 KCNH5Q8NCM2 988 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 LINGO1Q96FE5 620 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 LRRC3BQ96PB8 259 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 GBP5Q96PP8 586 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 SEPHS2Q99611 448 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 LMF2Q9BU23 707 aaKnown RBP4.82□□□□□ -1.64
LSM5-209ENST00000468872 MYNNQ9NPC7 610 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 DPP3Q9NY33 737 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 NME7Q9Y5B8 376 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 TCF20Q9UGU0 1960 aaKnown RBP4.82□□□□□ -1.64
LSM5-209ENST00000468872 CEP164Q9UPV0 1460 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 CHD1O14646 1710 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 SOS1Q07889 1333 aaPredicted RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 SAA2-SAA4A0A096LPE2 208 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 A0A0G2JNG1 304 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 CCDC188H7C350 402 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 ACP2P11117 423 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 CSF2RAP15509 400 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 CBLP22681 906 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 MCCP23508 829 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 MPZP25189 248 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 AZGP1P25311 298 aaKnown RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 HSPA4P34932 840 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 LIMK1P53667 647 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 TPD52P55327 224 aaPredicted RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 KIR2DS5Q14953 304 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 NDUFAF5Q5TEU4 345 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 CAVIN1Q6NZI2 390 aaKnown RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 USP43Q70EL4 1123 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 PIWIL4Q7Z3Z4 852 aaKnown RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 METTL23Q86XA0 190 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 CCAR2Q8N163 923 aaKnown RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 MUC20Q8N307 709 aaPredicted RBP4.81□□□□□ -1.64
LSM5-209ENST00000468872 L3MBTL4Q8NA19 623 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 IQUBQ8NA54 791 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 ATL1Q8WXF7 558 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 SORCS1Q8WY21 1168 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 SFXN2Q96NB2 322 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 MUS81Q96NY9 551 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 ZWILCHQ9H900 591 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 ACKR4Q9NPB9 350 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 PFDN4Q9NQP4 134 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 MDFICQ9P1T7 246 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 RNF150Q9ULK6 438 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 PADI2Q9Y2J8 665 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 TOP2BQ02880 1626 aa4.81□□□□□ -1.64
LSM5-209ENST00000468872 FLT1P17948 1338 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 TULP2O00295 520 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 ATP5BP06576 529 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 ZNF23P17027 643 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 HSPA1LP34931 641 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 SLC9A3P48764 834 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 BFSP1Q12934 665 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 IRAK1BP1Q5VVH5 260 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 PRR27Q6MZM9 219 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 SHQ1Q6PI26 577 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 UNQ6126/PRO20091Q6UXV3 157 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 PACS1Q6VY07 963 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 TUBA1AQ71U36 451 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 DET1Q7L5Y6 550 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 ADCK2Q7Z695 626 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 TMPRSS11BQ86T26 416 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 MFN1Q8IWA4 741 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 OR8H3Q8N146 312 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 CRYBG2Q8N1P7 616 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 GOT1L1Q8NHS2 421 aaPredicted RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 ROBO4Q8WZ75 1007 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 SPSB1Q96BD6 273 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 SPAG5Q96R06 1193 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 TUBA1CQ9BQE3 449 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 MGME1Q9BQP7 344 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 BTBD10Q9BSF8 475 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 ALDH8A1Q9H2A2 487 aaPredicted RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 FZD8Q9H461 694 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 ZNF556Q9HAH1 456 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 Q9N2K0 584 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 POU2F3Q9UKI9 436 aa4.8□□□□□ -1.64
LSM5-209ENST00000468872 ABT1Q9ULW3 272 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 SETD1AO15047 1707 aaKnown RBP4.8□□□□□ -1.64
LSM5-209ENST00000468872 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 MED19A0JLT2 244 aaPredicted RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 HYKKA2RU49 373 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 ASPDHA6ND91 283 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 CLIC2O15247 247 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 PDE9AO76083 593 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 H1F0P07305 194 aaKnown RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 CKMT2P17540 419 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms