RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 F8W8V4 182 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ERVH48-1M5A8F1 160 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 CES2O00748 559 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 NKX2-8O15522 239 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 GPC4O75487 556 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ZBTB11O95625 1053 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 NTRK1P04629 796 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 PVRP15151 417 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 FNTAP49354 379 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ACY1Q03154 408 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 DHX34Q14147 1143 aaKnown RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 PRAMEF17Q5VTA0 474 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 C6orf15Q6UXA7 325 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 SDCCAG8Q86SQ7 713 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 KMT5CQ86Y97 462 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 TBC1D21Q8IYX1 336 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ADGRF3Q8IZF5 1079 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 AGGF1Q8N302 714 aaeCLIP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 D2HGDHQ8N465 521 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 C2orf73Q8N5S3 287 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 NAT8LQ8N9F0 302 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 MCUQ8NE86 351 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 EXTL1Q92935 676 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF669Q96BR6 464 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 FAM136AQ96C01 138 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 TSSK1BQ9BXA7 367 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 SLC12A9Q9BXP2 914 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 GPN2Q9H9Y4 310 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 ACTR10Q9NZ32 417 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 IL17BQ9UHF5 180 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 TSR3Q9UJK0 312 aaKnown RBP11.2□□□□□ -0.62
CDHR3-205ENST00000468143 POMT2Q9UKY4 750 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 CRYL1Q9Y2S2 319 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 MAD1L1Q9Y6D9 718 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 LAMA5O15230 3695 aa11.2□□□□□ -0.62
CDHR3-205ENST00000468143 MAGEB16A2A368 324 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 PIPSLA2A3N6 862 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 C2orf74A8MZ97 194 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 APOA4P06727 396 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 MLNP12872 115 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ST6GAL1P15907 406 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 F8A1P23610 371 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 AOAHP28039 575 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 PLOD1Q02809 727 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 COL9A2Q14055 689 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 LINC00303Q3SY05 128 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ANKRD20A4Q4UJ75 823 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF789Q5FWF6 425 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 CTSL3PQ5NE16 218 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 PAPD7Q5XG87 772 aaKnown RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 KIAA0930Q6ICG6 404 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 NEPROQ6NW34 567 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 TRIM73Q86UV7 250 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 PPIL6Q8IXY8 311 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 SLC22A15Q8IZD6 547 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ESX1Q8N693 406 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 OR5K2Q8NHB8 316 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ASZ1Q8WWH4 475 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 KIAA1143Q96AT1 154 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF501Q96CX3 271 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 STAMBPL1Q96FJ0 436 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 BIRC8Q96P09 236 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 IL17FQ96PD4 163 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 SEMA4CQ9C0C4 833 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 AKIRIN1Q9H9L7 192 aaPredicted RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 C1GALT1Q9NS00 363 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 SPHK1Q9NYA1 384 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 GALPQ9UBC7 116 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 ASIC3Q9UHC3 531 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 POLG2Q9UHN1 485 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 GNPTGQ9UJJ9 305 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 MRPS18BQ9Y676 258 aaKnown RBP11.19□□□□□ -0.62
CDHR3-205ENST00000468143 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
CDHR3-205ENST00000468143 FAM237BA0A1B0GVD1 139 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 MATN2O00339 956 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 NIPSNAP2O75323 286 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 KATNA1O75449 491 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 BANF1O75531 89 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CHRM5P08912 532 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CCNYL3P0C7X3 344 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 PRKAR1AP10644 381 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 PAMP19021 973 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CHRM3P20309 590 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 RPS3P23396 243 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDHR3-205ENST00000468143 SHMT2P34897 504 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 DLSTP36957 453 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 STAT5AP42229 794 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 PTGIRP43119 386 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 TUBB4BP68371 445 aa11.18□□□□□ -0.62
CDHR3-205ENST00000468143 CTBP1Q13363 440 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms