RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 COPEO14579 308 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SLCO2B1O94956 709 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TNFP01375 233 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CSF2P04141 144 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 LINGO3P0C6S8 592 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 BRAFP15056 766 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 JUNDP17535 347 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DGKAP23743 735 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 HPDP32754 393 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 GLRBP48167 497 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 BLKP51451 505 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CTBSQ01459 385 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CBX3Q13185 183 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SEPT7Q16181 437 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 KIF19Q2TAC6 998 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TTLL9Q3SXZ7 439 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 THOC7Q6I9Y2 204 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PIWIL4Q7Z3Z4 852 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CLEC14AQ86T13 490 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PHACTR4Q8IZ21 702 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 BANPQ8N9N5 519 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SKA2Q8WVK7 121 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 NXNL1Q96CM4 212 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 APOPT1Q96IL0 206 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 C12orf65Q9H3J6 166 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 APOBEC3BQ9UH17 382 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 RUVBL2Q9Y230 463 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DMXL1Q9Y485 3027 aa6.71□□□□□ -1.33
SCAF4-204ENST00000467731 WDFY3Q8IZQ1 3526 aa6.71□□□□□ -1.33
SCAF4-204ENST00000467731 PCDH15Q96QU1 1955 aa6.71□□□□□ -1.33
SCAF4-204ENST00000467731 PATE3B3GLJ2 98 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 LSM1O15116 133 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 TYROBPO43914 113 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 KDM1AO60341 852 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 MTRF1O75570 445 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 KLHL2O95198 593 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CFIP05156 583 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CELA2BP08218 269 aaPredicted RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 GSTM1P09488 218 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 LTA4HP09960 611 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 NME1P15531 152 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CD1DP15813 335 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 VCLP18206 1134 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 SLC26A3P40879 764 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 RGS4P49798 205 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ARPC4P59998 168 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 BNC1Q01954 994 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 GSTM4Q03013 218 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 DMPKQ09013 629 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 LRP8Q14114 963 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 FAM83EQ2M2I3 478 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 METRNLQ641Q3 311 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 NCCRP1Q6ZVX7 275 aaPredicted RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 GLMNQ92990 594 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 LRRC61Q9BV99 259 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 FSCN3Q9NQT6 498 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 IGSF5Q9NSI5 407 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 TRNAU1APQ9NX07 287 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 KLHL42Q9P2K6 505 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ZMAT5Q9UDW3 170 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PSMD13Q9UNM6 376 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 SNX11Q9Y5W9 270 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 H3BM21 787 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ZBTB14O43829 449 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 GLRA3O75311 464 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CBSLP0DN79 551 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ENO3P13929 434 aaPredicted RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CTSEP14091 401 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CRHR1P34998 444 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 RPA3P35244 121 aaPredicted RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 HOXD12P35452 270 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CBSP35520 551 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ACTR1BP42025 376 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CTSKP43235 329 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ACTR1AP61163 376 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ILF3Q12906 894 aaKnown RBP eCLIP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 C1orf61Q13536 156 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 CCDC6Q16204 474 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 DUOXA1Q1HG43 343 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 AGAP9Q5VTM2 703 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 NRROSQ86YC3 692 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 SLC15A3Q8IY34 581 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 SLC22A15Q8IZD6 547 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 TCP10LQ8TDR4 215 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PTERQ96BW5 349 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 PPP1R14BQ96C90 147 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 GPR78Q96P69 363 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 DERL2Q9GZP9 239 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 OR52A5Q9H2C5 316 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 ARRDC1-AS1Q9H2J1 176 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 DPEP2Q9H4A9 486 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 KCNK9Q9NPC2 374 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 TMEM216Q9P0N5 145 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 DCDC2Q9UHG0 476 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms