RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MSL3P1P0C860 447 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 PVRP15151 417 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 PTGIRP43119 386 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 CCL11P51671 97 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 PGDP52209 483 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 GDF10P55107 478 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 GSTM4Q03013 218 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 SRSF1Q07955 248 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL9A3-206ENST00000466532 ZNF789Q5FWF6 425 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 ATCAYQ86WG3 371 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 PIANPQ8IYJ0 282 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 TRAPPC9Q96Q05 1148 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 TMEM121Q9BTD3 319 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 NLNQ9BYT8 704 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 SLC7A5P2Q9GIP4 190 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 ING2Q9H160 280 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 PCMTD2Q9NV79 361 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 ACTR10Q9NZ32 417 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 SMARCAL1Q9NZC9 954 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 SERTAD3Q9UJW9 196 aa18.57■□□□□ 0.56
COL9A3-206ENST00000466532 R3HDM2Q9Y2K5 976 aaKnown RBP18.57■□□□□ 0.56
COL9A3-206ENST00000466532 NUP210LQ5VU65 1888 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 MIF4GDA9UHW6 222 aaKnown RBP18.56■□□□□ 0.56
COL9A3-206ENST00000466532 PSMD3O43242 534 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 AP2A2O94973 939 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 AP2A1O95782 977 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 MSNP26038 577 aaKnown RBP18.56■□□□□ 0.56
COL9A3-206ENST00000466532 NSG1P42857 185 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 CD97P48960 835 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 KLF1Q13351 362 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-206ENST00000466532 SYTL1Q8IYJ3 562 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 ADGRF3Q8IZF5 1079 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 SYCE1Q8N0S2 351 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 ADAMTS17Q8TE56 1095 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 TCFL5Q9UL49 500 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 PCDHGA9Q9Y5G4 932 aaKnown RBP18.56■□□□□ 0.56
COL9A3-206ENST00000466532 PRSS21Q9Y6M0 314 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 ANKRD12Q6UB98 2062 aa18.56■□□□□ 0.56
COL9A3-206ENST00000466532 PCSK5Q92824 1860 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 CLEC18AA5D8T8 446 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 LIN7AO14910 233 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-206ENST00000466532 FTCDO95954 541 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 ITGA1P56199 1179 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 ITIH4Q14624 930 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 PTCHD3Q3KNS1 767 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 FAM69BQ5VUD6 431 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 FAM198BQ6UWH4 519 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 CLEC18BQ6UXF7 455 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 CDHR3Q6ZTQ4 885 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 HOOK3Q86VS8 718 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 CLEC18CQ8NCF0 446 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 OR5AR1Q8NGP9 310 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 SLC35B2Q8TB61 432 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 ELMO1Q92556 727 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 BAG1Q99933 345 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-206ENST00000466532 ICKQ9UPZ9 632 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 SHANK1Q9Y566 2161 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 LRRK2Q5S007 2527 aa18.55■□□□□ 0.56
COL9A3-206ENST00000466532 TCRBV7S2A1N4TA0A589 114 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 MROH6A6NGR9 719 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 OR51F1A6NGY5 319 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 TTLL8A6PVC2 850 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 E7EQ34 232 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 QSOX1O00391 747 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 TMEM63AO94886 807 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 FTH1P02794 183 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 CAPN1P07384 714 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 SHMT2P34897 504 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 KIF5AQ12840 1032 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 BRD3Q15059 726 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 CCDC38Q502W7 563 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 SPESP1Q6UW49 350 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 FAM26EQ8N5C1 309 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 OR52K1Q8NGK4 314 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 MLXIPLQ9NP71 852 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 ASF1AQ9Y294 204 aa18.54■□□□□ 0.56
COL9A3-206ENST00000466532 A0A0U1RQJ8 604 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 CCDC162PA2VCL2 907 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 ZNF749O43361 778 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 HBQ1P09105 142 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 UGT2B7P16662 529 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 PSMA3P25788 255 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 FOXN2P32314 431 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 NCF4Q15080 339 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 NADK2Q4G0N4 442 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 SYTL3Q4VX76 610 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 PACS1Q6VY07 963 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 UNC5AQ6ZN44 842 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 TRIM73Q86UV7 250 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 TXLNBQ8N3L3 684 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 C19orf47Q8N9M1 422 aaKnown RBP18.53■□□□□ 0.56
COL9A3-206ENST00000466532 DNAAF3Q8N9W5 541 aa18.53■□□□□ 0.56
COL9A3-206ENST00000466532 N4BP2L2Q92802 583 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-206ENST00000466532 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL9A3-206ENST00000466532 DPH2Q9BQC3 489 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-206ENST00000466532 TDRKHQ9Y2W6 561 aaKnown RBP18.53■□□□□ 0.56
COL9A3-206ENST00000466532 C9J4A7 227 aa18.52■□□□□ 0.56
COL9A3-206ENST00000466532 OR56A5P0C7T3 313 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms