RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SH2D4BQ5SQS7 431 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ADAMTSL4Q6UY14 1074 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 VRK3Q8IV63 474 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 SPEM1Q8N4L4 309 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 DEFB119Q8N690 84 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 KYQ8NBH2 561 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 COX14Q96I36 57 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 BTBD9Q96Q07 612 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 GPR174Q9BXC1 333 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 BDP1A6H8Y1 2624 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 CFAP99D6REC4 459 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 FUCA1P04066 466 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 UQCRBP14927 111 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 CD9P21926 228 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 CALRP27797 417 aaKnown RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 HSPA14Q0VDF9 509 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 LSM12Q3MHD2 195 aaKnown RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ARL13AQ5H913 290 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 TECRLQ5HYJ1 363 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 CWF19L1Q69YN2 538 aaKnown RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ZFP1Q6P2D0 407 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 HPS6Q86YV9 775 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ZNF547Q8IVP9 402 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ZBTB2Q8N680 514 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 GBP5Q96PP8 586 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 SYTL2Q9HCH5 934 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 TRIM39Q9HCM9 518 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 WSB2Q9NYS7 404 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 GULP1Q9UBP9 304 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 GRID2O43424 1007 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 PBLDP30039 288 aaPredicted RBP18.22■□□□□ 0.51
CAPN3-209ENST00000466222 TRIM23P36406 574 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 DNAJB13P59910 316 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 IL2P60568 153 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 MED21Q13503 144 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 CYLC2Q14093 348 aaPredicted RBP18.22■□□□□ 0.51
CAPN3-209ENST00000466222 BOP1Q14137 746 aaKnown RBP18.22■□□□□ 0.51
CAPN3-209ENST00000466222 TSNQ15631 228 aaKnown RBP18.22■□□□□ 0.51
CAPN3-209ENST00000466222 MAP7D1Q3KQU3 841 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 NEK5Q6P3R8 708 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 TEX101Q9BY14 249 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 SHCBP1LQ9BZQ2 653 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 WDR26Q9H7D7 661 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 CAAP1Q9H8G2 361 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 SGK2Q9HBY8 427 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 TM7SF3Q9NS93 570 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 PSMD13Q9UNM6 376 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 SLCO1B1Q9Y6L6 691 aa18.22■□□□□ 0.51
CAPN3-209ENST00000466222 NPEPPSL1A6NEC2 478 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 LRRC72A6NJI9 287 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 BTN3A1O00481 513 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 LILRB5O75023 590 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 IGLV3-19P01714 112 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 IGHV4-34P06331 123 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CHRNGP07510 517 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 AOAHP28039 575 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CLCN2P51788 898 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 DMWDQ09019 674 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ILF2Q12905 390 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ACAP2Q15057 778 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 PLA2G4EQ3MJ16 856 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 TSSK4Q6SA08 328 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CRTC3Q6UUV7 619 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 BNC2Q6ZN30 1099 aaPredicted RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 SNX32Q86XE0 403 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 TRAPPC5Q8IUR0 188 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 PGAM4Q8N0Y7 254 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 EXT2Q93063 718 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CCDC124Q96CT7 223 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 FAR2Q96K12 515 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 MRPL57Q9BQC6 102 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 MRPL46Q9H2W6 279 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 SLC24A3Q9HC58 644 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 LAMA1P25391 3075 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 IGHV1OR15-9A0A0B4J2B8 117 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 SCAMP1O15126 338 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 DLX3O60479 287 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 SLC26A3P40879 764 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 RPS9P46781 194 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 NUDT2P50583 147 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 NAGLUP54802 743 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 SFSWAPQ12872 951 aaKnown RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 FBXO48Q5FWF7 155 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 UGT3A1Q6NUS8 523 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 RNF111Q6ZNA4 994 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 TRIM69Q86WT6 500 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ST13P4Q8IZP2 240 aaPredicted RBP18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CATSPER1Q8NEC5 780 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ZFAND2BQ8WV99 257 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ELMO1Q92556 727 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 DLG3Q92796 817 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CCDC126Q96EE4 140 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 DERL2Q9GZP9 239 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CYP4F12Q9HCS2 524 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 ADAMTS6Q9UKP5 1117 aa18.21■□□□□ 0.51
CAPN3-209ENST00000466222 CCDC189A1A4V9 331 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 H3BNX3 289 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 APBB3O95704 486 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms