RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LIPT2A6NK58 231 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 SRPRAP08240 638 aaKnown RBP4.19□□□□□ -1.74
SMC4-205ENST00000465563 PSMA4P25789 261 aaKnown RBP4.19□□□□□ -1.74
SMC4-205ENST00000465563 GSCP56915 257 aaPredicted RBP4.19□□□□□ -1.74
SMC4-205ENST00000465563 HERV-K104P61576 105 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 RNF128Q8TEB7 428 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 RFFLQ8WZ73 363 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 POMGNT1Q8WZA1 660 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 SOSTQ9BQB4 213 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 POLR3GLQ9BT43 218 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 C1QTNF1Q9BXJ1 281 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 VN1R1Q9GZP7 353 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 AMACRQ9UHK6 382 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 ZDHHC2Q9UIJ5 367 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 PPP1R3CQ9UQK1 317 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 PCDHGA5Q9Y5G8 931 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 LYVE1Q9Y5Y7 322 aa4.19□□□□□ -1.74
SMC4-205ENST00000465563 ASTN2O75129 1339 aaPredicted RBP4.19□□□□□ -1.74
SMC4-205ENST00000465563 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 ZNF195O14628 629 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 ATP1A3P13637 1013 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 MMP12P39900 470 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 CAMPP49913 170 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 CX3CL1P78423 397 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 NFATC2Q13469 925 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 MDH1BQ5I0G3 518 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 GRTP1Q5TC63 336 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 Q6ZRP5 223 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 PDILTQ8N807 584 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 AZIN2Q96A70 460 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 EVI5LQ96CN4 794 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 THEGQ9P2T0 379 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 RARRES3Q9UL19 164 aa4.18□□□□□ -1.74
SMC4-205ENST00000465563 IGHV3OR16-10A0A075B7F0 116 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 TO15178 435 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 DFFBO76075 338 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 RTN3O95197 1032 aaPredicted RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 RBMS1P29558 406 aaKnown RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 OPRL1P41146 370 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 PAX9P55771 341 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 PNRC1Q12796 327 aaPredicted RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 IKQ13123 557 aaPredicted RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 TSTQ16762 297 aaKnown RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 ASTE1Q2TB18 679 aaPredicted RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 Q6ZR54 194 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 TEX11Q8IYF3 940 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 SLC39A11Q8N1S5 342 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 ZNF519Q8TB69 540 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 ARRDC1-AS1Q9H2J1 176 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 SH2D4AQ9H788 454 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 PANK4Q9NVE7 773 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 PAG1Q9NWQ8 432 aa4.17□□□□□ -1.74
SMC4-205ENST00000465563 LAS1LQ9Y4W2 734 aaKnown RBP4.17□□□□□ -1.74
SMC4-205ENST00000465563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.17□□□□□ -1.743e-11■■□□□ 12.4
SMC4-205ENST00000465563 IGLV3-10A0A075B6K4 115 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 GAPDHSO14556 408 aaPredicted RBP4.16□□□□□ -1.74
SMC4-205ENST00000465563 IDH3BO43837 385 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 MAGEC1O60732 1142 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 TMEM63AO94886 807 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 B3GALT5-AS1P59052 145 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 PRAMEP78395 509 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 KLHL26Q53HC5 615 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 TICAM1Q8IUC6 712 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 SCYL3Q8IZE3 742 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 KIRREL3Q8IZU9 778 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 OR10G8Q8NGN5 311 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 TBATAQ96M53 351 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 FNBP1Q96RU3 617 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 GRID1Q9ULK0 1009 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 ANGPTL3Q9Y5C1 460 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 SESN1Q9Y6P5 492 aa4.16□□□□□ -1.74
SMC4-205ENST00000465563 A0A1W2PPR1 153 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 CCDC189A1A4V9 331 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 A8MZ25 164 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 DDX58O95786 925 aaKnown RBP4.15□□□□□ -1.75
SMC4-205ENST00000465563 IGHV3-13P01766 116 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 DMPKQ09013 629 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 MELKQ14680 651 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 ERLEC1Q96DZ1 483 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 ARSGQ96EG1 525 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 SPHK2Q9NRA0 654 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 DIAPH3Q9NSV4 1193 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 PGAP2Q9UHJ9 254 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 EXO1Q9UQ84 846 aaKnown RBP4.15□□□□□ -1.75
SMC4-205ENST00000465563 NOTCH2Q04721 2471 aa4.15□□□□□ -1.75
SMC4-205ENST00000465563 A0A1B0GVC2 190 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 C15orf61A6NNL5 157 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 C22orf31O95567 290 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 RARGP13631 454 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 SLC6A6P31641 620 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 LEPRP48357 1165 aaKnown RBP4.14□□□□□ -1.75
SMC4-205ENST00000465563 PDX1P52945 283 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 C20orf194Q5TEA3 1177 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 KLHL35Q6PF15 583 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 CLEC17AQ6ZS10 378 aa4.14□□□□□ -1.75
SMC4-205ENST00000465563 ADIPOR2Q86V24 386 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms