RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 C1QTNF9BB2RNN3 333 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 C1QTNF9P0C862 333 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 AMD1P17707 334 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 LSSP48449 732 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 CUL1Q13616 776 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 KRT33BQ14525 404 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 C16orf72Q14CZ0 275 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 ACSBG2Q5FVE4 666 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 KLHL35Q6PF15 583 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 C3orf62Q6ZUJ4 267 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 SIDT2Q8NBJ9 832 aaKnown RBP19.76■□□□□ 0.75
SKA3-205ENST00000465471 WDR36Q8NI36 951 aaKnown RBP19.76■□□□□ 0.75
SKA3-205ENST00000465471 NDNQ99608 321 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 GPR21Q99679 349 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 POLR1BQ9H9Y6 1135 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 NSMCE4AQ9NXX6 385 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 MTRF1LQ9UGC7 380 aaKnown RBP19.76■□□□□ 0.75
SKA3-205ENST00000465471 POLG2Q9UHN1 485 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 SATB2Q9UPW6 733 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 PCDHGA8Q9Y5G5 932 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 ADAMTS20P59510 1910 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 PMS2P1A4D2B8 440 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 CAPN5O15484 640 aaPredicted RBP19.75■□□□□ 0.75
SKA3-205ENST00000465471 VPS26AO75436 327 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 SPAG6O75602 509 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 DXOO77932 396 aaKnown RBP19.75■□□□□ 0.75
SKA3-205ENST00000465471 MATN4O95460 622 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 ANKRD34CP0C6C1 535 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 MPSTP25325 297 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 ABCG1P45844 678 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 CDKN2DP55273 166 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 GRB7Q14451 532 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 TTLL9Q3SXZ7 439 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 PHF19Q5T6S3 580 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 CEP128Q6ZU80 1094 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 NEK10Q6ZWH5 1172 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 ZC3HC1Q86WB0 502 aaKnown RBP19.75■□□□□ 0.75
SKA3-205ENST00000465471 RASGRP3Q8IV61 690 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 LCN9Q8WX39 176 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 IFT81Q8WYA0 676 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 FMO2Q99518 471 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 NRTNQ99748 197 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 MENTQ9BUN1 341 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 TSPYL1Q9H0U9 437 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 SEMA5BQ9P283 1151 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 ICKQ9UPZ9 632 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 NFS1Q9Y697 457 aa19.75■□□□□ 0.75
SKA3-205ENST00000465471 TPRP12270 2363 aaKnown RBP19.75■□□□□ 0.75
SKA3-205ENST00000465471 CXorf49A8MYA2 514 aaPredicted RBP19.74■□□□□ 0.75
SKA3-205ENST00000465471 EIF3FO00303 357 aaPredicted RBP19.74■□□□□ 0.75
SKA3-205ENST00000465471 PLD2O14939 933 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 TOX3O15405 576 aaPredicted RBP19.74■□□□□ 0.75
SKA3-205ENST00000465471 RPN2P04844 631 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 MPOP05164 745 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 FDXRP22570 491 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 PPP1CAP62136 330 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 GABREP78334 506 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 ABRQ12979 859 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 PRKG2Q13237 762 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 C3orf38Q5JPI3 329 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 RAB11FIP2Q7L804 512 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 PRSS42Q7Z5A4 293 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 STRA8Q7Z7C7 330 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 OOSP2Q86WS3 158 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 SPNS2Q8IVW8 549 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 DCUN1D3Q8IWE4 304 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 RCBTB1Q8NDN9 531 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 OR4E2Q8NGC2 313 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 INPP5DQ92835 1189 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 ZMYND15Q9H091 742 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 LOXL2Q9Y4K0 774 aa19.74■□□□□ 0.75
SKA3-205ENST00000465471 OR6C74A6NCV1 312 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 PIAS1O75925 651 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 C1orf105O95561 183 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 RHOXF2BP0C7M4 288 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 CBSLP0DN79 551 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 ENO3P13929 434 aaPredicted RBP19.73■□□□□ 0.75
SKA3-205ENST00000465471 STX2P32856 288 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 CBSP35520 551 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 SKIV2L2P42285 1042 aaKnown RBP19.73■□□□□ 0.75
SKA3-205ENST00000465471 MLLT3P42568 568 aaPredicted RBP19.73■□□□□ 0.75
SKA3-205ENST00000465471 ILF2Q12905 390 aaKnown RBP19.73■□□□□ 0.75
SKA3-205ENST00000465471 KYNUQ16719 465 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 KLHL38Q2WGJ6 581 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 HECTD2Q5U5R9 776 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 FAM45BPQ6NSW5 357 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 AMIGO1Q86WK6 493 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 IFT20Q8IY31 132 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 ADGRF3Q8IZF5 1079 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 FAM45AQ8TCE6 357 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 CDKL2Q92772 493 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 ZDHHC12Q96GR4 267 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 TGM7Q96PF1 710 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 CMKLR1Q99788 373 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 RHOXF2Q9BQY4 288 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 FUT8Q9BYC5 575 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 SRMSQ9H3Y6 488 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 RHOJQ9H4E5 214 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 ASCL3Q9NQ33 180 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 HRASLS2Q9NWW9 162 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms