RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CBARPQ8N350 705 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ARL14Q8N4G2 192 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 CLEC18CQ8NCF0 446 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ACVR1CQ8NER5 493 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 OR6Y1Q8NGX8 325 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 WDR36Q8NI36 951 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 PIWIL2Q8TC59 973 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 STON2Q8WXE9 905 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 UBXN10Q96LJ8 280 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 TUBB6Q9BUF5 446 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 OSBPL1AQ9BXW6 950 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SYNDIG1Q9H7V2 258 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 HECAQ9UBI9 543 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SLC30A1Q9Y6M5 507 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ITPR2Q14571 2701 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 LRRK1Q38SD2 2015 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 CACNA1DQ01668 2161 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 H3BMM5 538 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 AGRPO00253 132 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 DNAJC6O75061 913 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 VPS26AO75436 327 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 WISP3O95389 354 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ESR1P03372 595 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 CTSLP07711 333 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ITGALP20701 1170 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ATP5F1P24539 256 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 MC4RP32245 332 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 CCNHP51946 323 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 DNAJB13P59910 316 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 NAA20P61599 178 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 FZD2Q14332 565 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 TBR1Q16650 682 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 GPR33Q49SQ1 333 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 RBM20Q5T481 1227 aaKnown RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 Q6ZVU0 165 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 PIWIL4Q7Z3Z4 852 aaKnown RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 FSTL5Q8N475 847 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 GPR78Q96P69 363 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 MCCC1Q96RQ3 725 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 NDNQ99608 321 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 SUV39H2Q9H5I1 410 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ZFYVE1Q9HBF4 777 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 GPR27Q9NS67 375 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 RAD18Q9NS91 495 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 TXLNGQ9NUQ3 528 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 FKBPLQ9UIM3 349 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 SLC12A4Q9UP95 1085 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 ZFR2Q9UPR6 939 aaKnown RBP13.58□□□□□ -0.24
HDAC6-215ENST00000465457 MAN2B2Q9Y2E5 1009 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
HDAC6-215ENST00000465457 LRP4O75096 1905 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 C1orf232A0A0U1RR37 186 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 EME2A4GXA9 379 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-215ENST00000465457 OR51F1A6NGY5 319 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 TARM1B6A8C7 271 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 SLCO1B7G3V0H7 640 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 CCL22O00626 93 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 AURKAO14965 403 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 RAD51BO15315 384 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 BUD23O43709 281 aaKnown RBP13.57□□□□□ -0.24
HDAC6-215ENST00000465457 BNIP3LO60238 219 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 PIGNO95427 931 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ITGB2P05107 769 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 NUDT1P36639 197 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ATP6V0D1P61421 351 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ITGA9Q13797 1035 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 FGL2Q14314 439 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 GALNTL6Q49A17 601 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ACCSLQ4AC99 568 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ZRANB3Q5FWF4 1079 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF789Q5FWF6 425 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 TECRLQ5HYJ1 363 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 FAM91A1Q658Y4 838 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 Q6ZSR6 202 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 LYSMD3Q7Z3D4 306 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ABI3BPQ7Z7G0 1075 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
HDAC6-215ENST00000465457 GRIN3AQ8TCU5 1115 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 OR8D1Q8WZ84 308 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 SCRN2Q96FV2 425 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 RMDN2Q96LZ7 410 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 OLFM1Q99784 485 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms