RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CLIP3Q96DZ5 547 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 FAM118BQ9BPY3 351 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 CEP41Q9BYV8 373 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
SNX17-205ENST00000464279 RAB33BQ9H082 229 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 EPS8L2Q9H6S3 715 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 ATP13A2Q9NQ11 1180 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 P4HTMQ9NXG6 502 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 PCYT1BQ9Y5K3 369 aaPredicted RBP12.16□□□□□ -0.46
SNX17-205ENST00000464279 CNTRLQ7Z7A1 2325 aa12.16□□□□□ -0.46
SNX17-205ENST00000464279 NCOA6Q14686 2063 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 H7C0C1 242 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 PSMD11O00231 422 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 LDB2O43679 373 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 DNAJC6O75061 913 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 ATP1A1P05023 1023 aaKnown RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 RBP3P10745 1247 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 XRCC1P18887 633 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 PTPN3P26045 913 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 ADSLP30566 484 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 CXCR5P32302 372 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 ATP5OP48047 213 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 PPP1CAP62136 330 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 DSC2Q02487 901 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 ITKQ08881 620 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 SSPNQ14714 243 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 GPR19Q15760 415 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 AGAP7PQ5VUJ5 663 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 CDKL3Q8IVW4 592 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 ARRDC2Q8TBH0 407 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 ZNF501Q96CX3 271 aaPredicted RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 AGAP4Q96P64 663 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 TRIM56Q9BRZ2 755 aaKnown RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 DHRS4Q9BTZ2 278 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 C10orf88Q9H8K7 445 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 VPS18Q9P253 973 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
SNX17-205ENST00000464279 PCDHGC4Q9Y5F7 938 aa12.15□□□□□ -0.46
SNX17-205ENST00000464279 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 TRAFD1O14545 582 aaPredicted RBP12.14□□□□□ -0.47
SNX17-205ENST00000464279 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
SNX17-205ENST00000464279 CEP104O60308 925 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 SOCS5O75159 536 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 HEXAP06865 529 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 LHCGRP22888 699 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 RBL1P28749 1068 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 GNG11P61952 73 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 ADAM8P78325 824 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 HSD11B2P80365 405 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 NIPAL4Q0D2K0 466 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
SNX17-205ENST00000464279 DSG2Q14126 1118 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 INAQ16352 499 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 TEX44Q53QW1 395 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 FAM182AQ5T1J6 154 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 PRAMEF17Q5VTA0 474 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 IRAK1BP1Q5VVH5 260 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 DARS2Q6PI48 645 aaKnown RBP12.14□□□□□ -0.47
SNX17-205ENST00000464279 C17orf53Q8N3J3 647 aaPredicted RBP12.14□□□□□ -0.47
SNX17-205ENST00000464279 D2HGDHQ8N465 521 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNX17-205ENST00000464279 SLC35B2Q8TB61 432 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 COX14Q96I36 57 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 WDR24Q96S15 920 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 PCMTD2Q9NV79 361 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 SEC14L3Q9UDX4 400 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
SNX17-205ENST00000464279 SLC19A2O60779 497 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 KLF7O75840 302 aaPredicted RBP12.13□□□□□ -0.47
SNX17-205ENST00000464279 FGGP02679 453 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 PYGLP06737 847 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 CYP2A6P11509 494 aaPredicted RBP12.13□□□□□ -0.47
SNX17-205ENST00000464279 CES1P23141 567 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 SLC19A1P41440 591 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 TRAF2Q12933 501 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 GPR18Q14330 331 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 IHHQ14623 411 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 SIX1Q15475 284 aaPredicted RBP12.13□□□□□ -0.47
SNX17-205ENST00000464279 CYP2A13Q16696 494 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 PTCHD3Q3KNS1 767 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 ZNF567Q8N184 647 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 ATG4AQ8WYN0 398 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 AP2M1Q96CW1 435 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 PBKQ96KB5 322 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 TEKT5Q96M29 485 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 ALPK1Q96QP1 1244 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 TAAR6Q96RI8 345 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 VAT1Q99536 393 aa12.13□□□□□ -0.47
SNX17-205ENST00000464279 MAP3K3Q99759 626 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms