RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 ZNF624Q9P2J8 865 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZFP37Q9Y6Q3 630 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 A0A087X0M5 115 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 A0A1B0GX30 115 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 MAGEB16A2A368 324 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 AXIN1O15169 862 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 NDUFS2O75306 463 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CCNKO75909 580 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 LDLRP01130 860 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 KRT6AP02538 564 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 HRGP04196 525 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 KRT6BP04259 564 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FYNP06241 537 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ARSAP15289 507 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PRKACBP22694 351 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ATP5F1P24539 256 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CYP2F1P24903 491 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GRK3P35626 688 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 EIF2DP41214 584 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ASPAP45381 313 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GLRBP48167 497 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CLCNKBP51801 687 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GABARAPL2P60520 117 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FPGSQ05932 587 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 DSC1Q08554 894 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GALNT1Q10472 559 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FRG1Q14331 258 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 UPP1Q16831 310 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CYP51A1Q16850 503 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF181Q2M3W8 571 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZIK1Q3SY52 487 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CCDC14Q49A88 953 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CEP78Q5JTW2 689 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FKBP9P1Q75LS8 142 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 C16orf59Q7L2K0 433 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FUNDC1Q8IVP5 155 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FSTL5Q8N475 847 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 MINDY1Q8N5J2 469 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CCNYL1Q8N7R7 359 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 OR13J1Q8NGT2 312 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PSMA8Q8TAA3 256 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 NDNFQ8TB73 568 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 DYNC2LI1Q8TCX1 351 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 HTR3CQ8WXA8 447 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 LRCH3Q96II8 777 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ELMO2Q96JJ3 720 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 SPATA17Q96L03 361 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF560Q96MR9 790 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ALOXE3Q9BYJ1 711 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 FAM124BQ9H5Z6 455 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF304Q9HCX3 659 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PDE10AQ9Y233 779 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZFC3H1O60293 1989 aaKnown RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TCRBV5S2A0A599 114 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF99A8MXY4 864 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 ARPC2O15144 300 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 RAD51BO15315 384 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TEX28O15482 410 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 MAN1A2O60476 641 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 SEC24AO95486 1093 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 DLGAP3O95886 979 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 FGBP02675 491 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 SOD2P04179 222 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 UMPSP11172 480 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 PCMT1P22061 227 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 IFNA8P32881 189 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 CD68P34810 354 aaPredicted RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TUFMP49411 452 aaKnown RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TAF6P49848 677 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 LILRA4P59901 499 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 WDR5P61964 334 aaKnown RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TUBA1BP68363 451 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 PIGFQ07326 219 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 C19orf57Q0VDD7 668 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 PSMD5Q16401 504 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 PPP1R3AQ16821 1122 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 SV2CQ496J9 727 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 CATSPEREQ5SY80 951 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 C6orf141Q5SZD1 244 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TSTD2Q5T7W7 516 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TUBA1AQ71U36 451 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 TMEM135Q86UB9 458 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF280BQ86YH2 543 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 SLC38A6Q8IZM9 456 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 LGI2Q8N0V4 545 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 POC5Q8NA72 575 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 OR9I1Q8NGQ6 314 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 NANOS1Q8WY41 292 aaKnown RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 VPS39Q96JC1 886 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 DACH2Q96NX9 599 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 SNRNP25Q9BV90 132 aaKnown RBP8.54□□□□□ -1.04
SHQ1-203ENST00000463369 BTBD2Q9BX70 525 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 CLPBQ9H078 707 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 CYP3A43Q9HB55 503 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 ABCB10Q9NRK6 738 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 CMTM6Q9NX76 183 aa8.54□□□□□ -1.04
SHQ1-203ENST00000463369 GTSE1Q9NYZ3 720 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms