RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ADGRG5Q8IZF4 528 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 OR52K2Q8NGK3 314 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 DDI1Q8WTU0 396 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 ZBTB9Q96C00 473 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 PABPC5Q96DU9 382 aaKnown RBP7.35□□□□□ -1.23
UBE4B-204ENST00000462658 SLC46A1Q96NT5 459 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 ZIM3Q96PE6 472 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 RUFY1Q96T51 708 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 CDC42EP4Q9H3Q1 356 aaKnown RBP7.35□□□□□ -1.23
UBE4B-204ENST00000462658 GLOD4Q9HC38 313 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 EIF2B3Q9NR50 452 aaKnown RBP7.35□□□□□ -1.23
UBE4B-204ENST00000462658 NINJ2Q9NZG7 142 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 PLEKHM1Q9Y4G2 1056 aa7.35□□□□□ -1.23
UBE4B-204ENST00000462658 TRGV11A0A075B6L2 103 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ERI2A8K979 691 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 AGPSO00116 658 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 CACNG3O60359 315 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 FZD7O75084 574 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 AVILO75366 819 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 BANF1O75531 89 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ANXA9O76027 345 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 LUC7L3O95232 432 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 AP2A1O95782 977 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 GLP2RO95838 553 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 HLA-DQB2P05538 268 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 NUDT17P0C025 328 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MLNP12872 115 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MYF5P13349 255 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 BRAFP15056 766 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 HOXD9P28356 352 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MMP13P45452 471 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 IFNAR2P48551 515 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 NUMBP49757 651 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 EIF3BP55884 814 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 RPS7P62081 194 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 IFFO1Q0D2I5 559 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SLC10A7Q0GE19 358 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 CTBP1Q13363 440 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 CDH18Q13634 790 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SPARCL1Q14515 664 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF77Q15935 545 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 DNAJC21Q5F1R6 531 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 FSCBQ5H9T9 825 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 UBAP2Q5T6F2 1119 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ARMC6Q6NXE6 501 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ANKRD54Q6NXT1 300 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 LRRC8BQ6P9F7 803 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SYCE2Q6PIF2 218 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF783Q6ZMS7 281 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 LEKR1Q6ZMV7 388 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 CAND1Q86VP6 1230 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SLC15A4Q8N697 577 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TEX26Q8N6G2 289 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 PYROXD1Q8WU10 500 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TTC17Q96AE7 1141 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 OTUB2Q96DC9 234 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 C9orf72Q96LT7 481 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TTC25Q96NG3 672 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 ZNF599Q96NL3 588 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SERPINB12Q96P63 405 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 PPP1R2P1Q96PQ5 205 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 FCRL5Q96RD9 977 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 LINC00597Q9H2U6 94 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 KIF9Q9HAQ2 790 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SMURF2Q9HAU4 748 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 XAB2Q9HCS7 855 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 SACM1LQ9NTJ5 587 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 PLK2Q9NYY3 685 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TBC1D14Q9P2M4 693 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 XPR1Q9UBH6 696 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TESQ9UGI8 421 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 AAR2Q9Y312 384 aaKnown RBP7.34□□□□□ -1.23
UBE4B-204ENST00000462658 TTLL3Q9Y4R7 772 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 NFS1Q9Y697 457 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 MTCH2Q9Y6C9 303 aa7.34□□□□□ -1.23
UBE4B-204ENST00000462658 NCOR1O75376 2440 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 PIPSLA2A3N6 862 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 TMEM233B4DJY2 109 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SLC9A3R1O14745 358 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 ACSL3O95573 720 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FSHBP01225 129 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SHBGP04278 402 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 EGR2P11161 476 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FOSL2P15408 326 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 HOXB8P17481 243 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 CSKP41240 450 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 ELK3P41970 407 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 GRIA1P42261 906 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 MAGEA3P43357 314 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 GEMP55040 296 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SLC13A2Q13183 592 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 ZNF235Q14590 738 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 RFTN1Q14699 578 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 CCDC38Q502W7 563 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms