RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SHBGP04278 402 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 RPLP0P05388 317 aaKnown RBP11.48□□□□□ -0.57
CPNE1-221ENST00000462352 MPC1LP0DKB6 136 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 CDK4P11802 303 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 STMN1P16949 149 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 ZNF37AP17032 561 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-221ENST00000462352 GCAP28676 217 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 RGS4P49798 205 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 SERPINB9P50453 376 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 EPHA4P54764 986 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 IL2P60568 153 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 GPLD1P80108 840 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 E2F1Q01094 437 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 PLCL1Q15111 1095 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 ZKSCAN8Q15776 578 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-221ENST00000462352 AMZ1Q400G9 498 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 MROH9Q5TGP6 573 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 TMEM207Q6UWW9 146 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 DHRS13Q6UX07 377 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
CPNE1-221ENST00000462352 OR52E1Q8NGJ3 308 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 DCAKDQ8WVC6 231 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 LINGO1Q96FE5 620 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 FOPNLQ96NB1 174 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 CCDC77Q9BR77 488 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 DHRS4Q9BTZ2 278 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 LRRN3Q9H3W5 708 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 SYNDIG1Q9H7V2 258 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 SYTL2Q9HCH5 934 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 POLG2Q9UHN1 485 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 ZNF180Q9UJW8 692 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 RP1P56715 2156 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 NTN3O00634 580 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 PHGDHO43175 533 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 PSIP1O75475 530 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 WISP3O95389 354 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 C1orf105O95561 183 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 RPN2P04844 631 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 TPBGLP0DKB5 382 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 CD1CP29017 333 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 CCNFP41002 786 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 MAPK9P45984 424 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 BDKRB1P46663 353 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 RAB10P61026 200 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 INSM1Q01101 510 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 NKAIN2Q5VXU1 208 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 TAOK1Q7L7X3 1001 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 CMC1Q7Z7K0 106 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 MYO1HQ8N1T3 1032 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 MREGQ8N565 214 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 NKAPQ8N5F7 415 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 OR10G6Q8NH81 332 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 WDR48Q8TAF3 677 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 ANKRD49Q8WVL7 239 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 ASB11Q8WXH4 323 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 AHCYL2Q96HN2 611 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 GFM1Q96RP9 751 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 FETUBQ9UGM5 382 aa11.47□□□□□ -0.57
CPNE1-221ENST00000462352 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
CPNE1-221ENST00000462352 ARHGEF33A8MVX0 844 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 GFYI3L273 518 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CTIFO43310 598 aaKnown RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 DUX1O43812 170 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 KRT38O76015 456 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 UBXN7O94888 489 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CPNE6O95741 557 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CATP04040 527 aaKnown RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 PROS1P07225 676 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 NUDT17P0C025 328 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 TYRP1P17643 537 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 AMD1P17707 334 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CNTFP26441 200 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 PPM1FP49593 454 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CLDN6P56747 220 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CFHR1Q03591 330 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 SQSTM1Q13501 440 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 SPIDRQ14159 915 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 GRB7Q14451 532 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 CCSMST1Q4G0I0 132 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 N4BP2L1Q5TBK1 243 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 TTC23LQ6PF05 361 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 RAPH1Q70E73 1250 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 DGLUCYQ7Z3D6 616 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 RASGRP3Q8IV61 690 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 LCN9Q8WX39 176 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 ADAMTS14Q8WXS8 1223 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 NCSTNQ92542 709 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 RSC1A1Q92681 617 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 RAD51AP1Q96B01 352 aa11.46□□□□□ -0.57
CPNE1-221ENST00000462352 PDLIM5Q96HC4 596 aaKnown RBP11.46□□□□□ -0.57
CPNE1-221ENST00000462352 NRTNQ99748 197 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms