RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CSE1LP55060 971 aaKnown RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 CDK16Q00536 496 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 MC1RQ01726 317 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 GPS1Q13098 491 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PRKG2Q13237 762 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 KCNJ11Q14654 390 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 TMED2Q15363 201 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 GPR19Q15760 415 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PWWP2BQ6NUJ5 590 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 TTC27Q6P3X3 843 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 LRRC8BQ6P9F7 803 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 LDB1Q86U70 411 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 TBC1D21Q8IYX1 336 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 MPP5Q8N3R9 675 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 EXD3Q8N9H8 876 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PHC3Q8NDX5 983 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 OR5K2Q8NHB8 316 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 ZNF501Q96CX3 271 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 MS4A14Q96JA4 679 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PBKQ96KB5 322 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 FCRL4Q96PJ5 515 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 AP1M1Q9BXS5 423 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PITPNM3Q9BZ71 974 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 XKR8Q9H6D3 395 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 MRM3Q9HC36 420 aaKnown RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 C1GALT1Q9NS00 363 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 GNPTGQ9UJJ9 305 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 HELZ2Q9BYK8 2649 aaKnown RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 PIPSLA2A3N6 862 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SLC9B1P1A6NJY1 282 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 BHMG1C9JSJ3 638 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 PRMT5O14744 637 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 CD3EAPO15446 510 aaKnown RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 NKX2-8O15522 239 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KDM1AO60341 852 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SCRG1O75711 98 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 TMEM63AO94886 807 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KRT14P02533 472 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 PLA2G2AP14555 144 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ST6GAL1P15907 406 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 TCN2P20062 427 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 F8A1P23610 371 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 PRDX3P30048 256 aaKnown RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 MAGEA6P43360 314 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 NPY2RP49146 381 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 POLE2P56282 527 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 HSPA14Q0VDF9 509 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ANKRD22Q5VYY1 191 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 C16orf46Q6P387 395 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SPESP1Q6UW49 350 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ZNF605Q86T29 641 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 TMEM126BQ8IUX1 230 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SLC22A15Q8IZD6 547 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ADGRF3Q8IZF5 1079 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KRT222Q8N1A0 295 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SLC35F6Q8N357 371 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 OR8K5Q8NH50 307 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 CT55Q8WUE5 264 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 MAGOHBQ96A72 148 aaKnown RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 MFSD3Q96ES6 412 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 NAP1L3Q99457 506 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KIFC1Q9BW19 673 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KCNF1Q9H3M0 494 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 LATS2Q9NRM7 1088 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 ACTR10Q9NZ32 417 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 POLG2Q9UHN1 485 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 KCND3Q9UK17 655 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 PLAGL1Q9UM63 463 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
SF3A3-204ENST00000462258 TDRKHQ9Y2W6 561 aaKnown RBP9.86□□□□□ -0.83
SF3A3-204ENST00000462258 SPTA1P02549 2419 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 IQCF5A8MTL0 148 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 C21orf140B9A014 251 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 TMEM150CB9EJG8 249 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 TERTO14746 1132 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 KIF5CO60282 957 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PHF2O75151 1096 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 NTRK1P04629 796 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 RPN2P04844 631 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 APOA4P06727 396 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 SFTPCP11686 197 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PVRP15151 417 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 UGT2B7P16662 529 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 ARNTP27540 789 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PKLRP30613 574 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CCR7P32248 378 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CCR10P46092 362 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 EIF3BP55884 814 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 SARNPP82979 210 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 NFATC3Q12968 1075 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 ABRQ12979 859 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 KCNAB2Q13303 367 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 DNASE1L3Q13609 305 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CYP1B1Q16678 543 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms