RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TBC1D14Q9P2M4 693 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 LRWD1Q9UFC0 647 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 CPQQ9Y646 472 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 STYXL1Q9Y6J8 313 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 FBN2P35556 2912 aa4.93□□□□□ -1.62
COPS3-204ENST00000462236 POLEQ07864 2286 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 A0A1B0GVC2 190 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 A0A1B0GVT2 93 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CLEC18AA5D8T8 446 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 C16orf96A6NNT2 1141 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 KPNA7A9QM74 516 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 RRP8O43159 456 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 HCRTO43612 131 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CACNG3O60359 315 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CD63P08962 238 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 OR52Z1P0C646 297 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CDK4P11802 303 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CKMT1AP12532 417 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 HOXB9P17482 250 aaPredicted RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 IDUAP35475 653 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CCT6AP40227 531 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 PPP3CCP48454 512 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ACADVLP49748 655 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ADPRHP54922 357 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CLDN6P56747 220 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 PROK1P58294 105 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 NOP14P78316 857 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 TSPY1Q01534 308 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 GAD2Q05329 585 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 KPNB1Q14974 876 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 TMEM132DQ14C87 1099 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 KIF19Q2TAC6 998 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ANXA2RQ3ZCQ2 193 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 KCNT1Q5JUK3 1230 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CBWD5Q5RIA9 395 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 SNX30Q5VWJ9 437 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 NAA35Q5VZE5 725 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ZNF474Q6S9Z5 364 aaPredicted RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 CLEC18BQ6UXF7 455 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CRELD2Q6UXH1 353 aaPredicted RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 RBM44Q6ZP01 1051 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 METTL23Q86XA0 190 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 DIS3L2Q8IYB7 885 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 TMEM86AQ8N2M4 240 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 EXD3Q8N9H8 876 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CLEC18CQ8NCF0 446 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CEP70Q8NHQ1 597 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CLEC4CQ8WTT0 213 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ZFPM2Q8WW38 1151 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 IGSF8Q969P0 613 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 WBP2Q969T9 261 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 SH3KBP1Q96B97 665 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 MED8Q96G25 268 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 GPR78Q96P69 363 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ABHD14AQ9BUJ0 271 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 PLEKHA2Q9HB19 425 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 SPHK2Q9NRA0 654 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 GDAP2Q9NXN4 497 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 DPP3Q9NY33 737 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 IL37Q9NZH6 218 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 ORC3Q9UBD5 711 aaPredicted RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 IL17BQ9UHF5 180 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 DOCK4Q8N1I0 1966 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 CNTRLQ7Z7A1 2325 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 SEC16AO15027 2179 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 SPG11Q96JI7 2443 aa4.92□□□□□ -1.62
COPS3-204ENST00000462236 MDC1Q14676 2089 aaKnown RBP4.92□□□□□ -1.62
COPS3-204ENST00000462236 ZGRF1Q86YA3 2104 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 A0A1B0GTQ1 180 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 FAM92AA1XBS5 289 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 WASH3PC4AMC7 463 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 MCIDASD6RGH6 385 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 DSCR3O14972 297 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 METTL18O95568 372 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ALDOCP09972 364 aaKnown RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 ZDHHC11BP0C7U3 371 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 TFEBP19484 476 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SCP2P22307 547 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ACAT1P24752 427 aaKnown RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 SOX2P48431 317 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 CSNK1EP49674 416 aaKnown RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 TPMTP51580 245 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ZNF131P52739 623 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ZNF132P52740 706 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SLC12A2P55011 1212 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SLC12A3P55017 1021 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SEMG2Q02383 582 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 CDK18Q07002 472 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ALKBH1Q13686 389 aaKnown RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 LY6DQ14210 128 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SHBQ15464 509 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 IL17AQ16552 155 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 FUT11Q495W5 492 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 TAF1BQ53T94 588 aaPredicted RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 C10orf76Q5T2E6 689 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 HES3Q5TGS1 186 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 MMS22LQ6ZRQ5 1243 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms