RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 F8W8V4 182 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 BTN3A1O00481 513 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
BRCA1-207ENST00000461798 KATNA1O75449 491 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 SCRG1O75711 98 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 GAS8O95995 478 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 FTH1P02794 183 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 NTRK1P04629 796 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 FURINP09958 794 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 OR56A5P0C7T3 313 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 CDH3P22223 829 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 PTPN4P29074 926 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 GRIA1P42261 906 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 PREPP48147 710 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ARCN1P48444 511 aaKnown RBP8.88□□□□□ -0.99
BRCA1-207ENST00000461798 NFKB2Q00653 900 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ERV3-1Q14264 604 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 RPS6KA1Q15418 735 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 SIX1Q15475 284 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-207ENST00000461798 GPR19Q15760 415 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF789Q5FWF6 425 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 PLEKHS1Q5SXH7 462 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ATP1A1-AS1Q5TC04 95 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 IZUMO3Q5VZ72 239 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 TCTN3Q6NUS6 607 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 FBXO38Q6PIJ6 1188 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 C4orf22Q6V702 233 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 MICALCLQ6ZW33 695 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF534Q76KX8 674 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 SYVN1Q86TM6 617 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 APLFQ8IW19 511 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-207ENST00000461798 TBC1D21Q8IYX1 336 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 DNAAF3Q8N9W5 541 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 SLC38A9Q8NBW4 561 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 OR4L1Q8NH43 312 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 THAP4Q8WY91 577 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 HDAC10Q969S8 669 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 TRAPPC9Q96Q05 1148 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 TTC1Q99614 292 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 CLMPQ9H6B4 373 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 RAB6BQ9NRW1 208 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 PAK5Q9P286 719 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 POLG2Q9UHN1 485 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ANAPC2Q9UJX6 822 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 FARSAQ9Y285 508 aaKnown RBP8.88□□□□□ -0.99
BRCA1-207ENST00000461798 ZKSCAN5Q9Y2L8 839 aa8.88□□□□□ -0.99
BRCA1-207ENST00000461798 OR51F1A6NGY5 319 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 C2orf74A8MZ97 194 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 E7EVH7 732 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 AP3B1O00203 1094 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 MEN1O00255 615 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 MAP3K7O43318 606 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 GOT2P00505 430 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 IFNB1P01574 187 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 KLK3P07288 261 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 RAB40ALP0C0E4 278 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 TPBGLP0DKB5 382 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ETS1P14921 441 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ST6GAL1P15907 406 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 SHMT2P34897 504 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 RPL22P35268 128 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 RORAP35398 523 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PPARGP37231 505 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 CASRP41180 1078 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PMS2P54278 862 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 RPS15P62841 145 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 GPS2Q13227 327 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PRKG2Q13237 762 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 UGT8Q16880 541 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PCID2Q5JVF3 399 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 FAM199XQ6PEV8 388 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 AFTPHQ6ULP2 937 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 PTRH1Q86Y79 214 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 TMEM126BQ8IUX1 230 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 DSELQ8IZU8 1212 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 TAB3Q8N5C8 712 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 GLIS1Q8NBF1 620 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 OR1L3Q8NH93 324 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 OR5K2Q8NHB8 316 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 FLVCR1-AS1Q8TAF5 88 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 CPT1BQ92523 772 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ELMO1Q92556 727 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 RNF31Q96EP0 1072 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF778Q96MU6 729 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 NRTNQ99748 197 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 CARD6Q9BX69 1037 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 CHST8Q9H2A9 424 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ACTL8Q9H568 366 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 FANCEQ9HB96 536 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 EIF2B3Q9NR50 452 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 SOHLH2Q9NX45 425 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ACTR10Q9NZ32 417 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 OR6C2Q9NZP2 312 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 SLC2A6Q9UGQ3 507 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 SERTAD3Q9UJW9 196 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ICKQ9UPZ9 632 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms