RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 CLDN19Q8N6F1 224 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 UBL4BQ8N7F7 174 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
SSB-206ENST00000461708 FAM71DQ8N9W8 422 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 CLIP3Q96DZ5 547 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 TRAPPC9Q96Q05 1148 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 SLC25A23Q9BV35 468 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 ACSS2Q9NR19 701 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 PCMTD2Q9NV79 361 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 SNX7Q9UNH6 387 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 TEX15Q9BXT5 2789 aa17.32■□□□□ 0.36
SSB-206ENST00000461708 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
SSB-206ENST00000461708 UNC79Q9P2D8 2635 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 METTL18O95568 372 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 AP2A1O95782 977 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 CYP2A7P20853 494 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 PDHA2P29803 388 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 ITGA1P56199 1179 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 DBN1Q16643 649 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 CPZQ66K79 652 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 FAM198BQ6UWH4 519 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 TAS2R42Q7RTR8 314 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 PEX26Q7Z412 305 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 LINC00523Q86TU6 105 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 SYTL1Q8IYJ3 562 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 SYCE1Q8N0S2 351 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 PHC3Q8NDX5 983 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 SLC35B2Q8TB61 432 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSB-206ENST00000461708 C17orf62Q9BQA9 187 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 AMFRQ9UKV5 643 aa17.31■□□□□ 0.36
SSB-206ENST00000461708 ESPL1Q14674 2120 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 NOTCH2Q04721 2471 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ICE1Q9Y2F5 2266 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ARGFXA6NJG6 315 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ERI2A8K979 691 aaKnown RBP17.3■□□□□ 0.36
SSB-206ENST00000461708 E7EQ34 232 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 FTH1P02794 183 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
SSB-206ENST00000461708 GP1BBP13224 206 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 TPH1P17752 444 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ACADLP28330 430 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 SHMT2P34897 504 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 PTGIRP43119 386 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 MLLT10P55197 1068 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 POU6F1Q14863 301 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 PRAMEF17Q5VTA0 474 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 LCN10Q6JVE6 187 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 SPESP1Q6UW49 350 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 MED25Q71SY5 747 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 TXLNBQ8N3L3 684 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 TMEM102Q8N9M5 508 aaPredicted RBP17.3■□□□□ 0.36
SSB-206ENST00000461708 GALNT11Q8NCW6 608 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 TCTN2Q96GX1 697 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ALS2CR12Q96Q35 445 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ACTR10Q9NZ32 417 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 OR6C2Q9NZP2 312 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 POLG2Q9UHN1 485 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 ZNF451Q9Y4E5 1061 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 AP1M2Q9Y6Q5 423 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 FER1L5A0AVI2 2057 aa17.3■□□□□ 0.36
SSB-206ENST00000461708 SHANK1Q9Y566 2161 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 SPENQ96T58 3664 aaKnown RBP17.29■□□□□ 0.36
SSB-206ENST00000461708 ANKRD12Q6UB98 2062 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 TMEM63AO94886 807 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 CCL11P51671 97 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 RRADP55042 308 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 NCF4Q15080 339 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 LYPLAL1Q5VWZ2 237 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 ZNF385CQ66K41 422 aaPredicted RBP17.29■□□□□ 0.36
SSB-206ENST00000461708 CDHR3Q6ZTQ4 885 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 TBC1D21Q8IYX1 336 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 GPR135Q8IZ08 494 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 GLIS1Q8NBF1 620 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 UBE2Q2Q8WVN8 375 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 HGH1Q9BTY7 390 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 SMARCAL1Q9NZC9 954 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 RIMKLBQ9ULI2 386 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 G3BP2Q9UN86 482 aaKnown RBP17.29■□□□□ 0.36
SSB-206ENST00000461708 ICKQ9UPZ9 632 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 PADI2Q9Y2J8 665 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 CENPEQ02224 2701 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 HIVEP3Q5T1R4 2406 aa17.29■□□□□ 0.36
SSB-206ENST00000461708 TTLL8A6PVC2 850 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 C9J4A7 227 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 F8W8V4 182 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 ZNF749O43361 778 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 KDM1AO60341 852 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 SORBS2O94875 1100 aaKnown RBP17.28■□□□□ 0.36
SSB-206ENST00000461708 CD63P08962 238 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 PRSS56P0CW18 603 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 AGXTP21549 392 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
SSB-206ENST00000461708 STIP1P31948 543 aaKnown RBP17.28■□□□□ 0.36
SSB-206ENST00000461708 LMAN1P49257 510 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 CHAF1BQ13112 559 aa17.28■□□□□ 0.36
SSB-206ENST00000461708 PRKG2Q13237 762 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms