RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SDHDO14521 159 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 MRASO14807 208 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 CHUKO15111 745 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 RASGRP1O95267 797 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 SEMA4FO95754 770 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 BAG2O95816 211 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 LMNAP02545 664 aaKnown RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 GNAZP19086 355 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PSMA3P25788 255 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 GRK3P35626 688 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 GNPDA1P46926 289 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 RPL38P63173 70 aaKnown RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 CDK3Q00526 305 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ACSM2AQ08AH3 577 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 CDC16Q13042 620 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 CHIT1Q13231 466 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PRKG2Q13237 762 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 MLF2Q15773 248 aaPredicted RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 WSCD2Q2TBF2 565 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 TMEM198Q66K66 360 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ACSM2BQ68CK6 577 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ARMC6Q6NXE6 501 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PNCKQ6P2M8 343 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ENPP7Q6UWV6 458 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 BNC2Q6ZN30 1099 aaPredicted RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 NEK10Q6ZWH5 1172 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 TMPRSS11BQ86T26 416 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 C17orf64Q86WR6 236 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 HID1Q8IV36 788 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 DCUN1D3Q8IWE4 304 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 RGL4Q8IZJ4 473 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 DEFB107AQ8IZN7 70 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 KRT78Q8N1N4 520 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 IL17RCQ8NAC3 791 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PDPRQ8NCN5 879 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 HIPK4Q8NE63 616 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 OR2T34Q8NGX1 318 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 RP9Q8TA86 221 aaKnown RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 TFGQ92734 400 aaPredicted RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 FOXJ1Q92949 421 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 RSRC1Q96IZ7 334 aaKnown RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 MSLNLQ96KJ4 702 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 C12orf66Q96MD2 445 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 HBEGFQ99075 208 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 NELL2Q99435 816 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 MCMBPQ9BTE3 642 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ACAT2Q9BWD1 397 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 TBC1D10AQ9BXI6 508 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 SLC29A3Q9BZD2 475 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 DPY30Q9C005 99 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 C20orf27Q9GZN8 174 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 MIR1-1HGQ9H1L0 117 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 LMAN1LQ9HAT1 526 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 FBRSL1Q9HCM7 1045 aaKnown RBP4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 KLC4Q9NSK0 619 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 ATXN10Q9UBB4 475 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PCTPQ9UKL6 214 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 SLC12A4Q9UP95 1085 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 PDE10AQ9Y233 779 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 KCNK6Q9Y257 313 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 OR1A2Q9Y585 309 aa4.03□□□□□ -1.76
ATP13A3-206ENST00000461660 DOCK4Q8N1I0 1966 aa4.03□□□□□ -1.77
ATP13A3-206ENST00000461660 GREB1Q4ZG55 1949 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 KNL1Q8NG31 2342 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 MYOFQ9NZM1 2061 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 ARHGAP10A1A4S6 786 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 GRXCR2A6NFK2 248 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 TARM1B6A8C7 271 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 GAPDHSO14556 408 aaPredicted RBP4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SCAMP1O15126 338 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SLC22A2O15244 555 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 PI15O43692 258 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 ANP32DO95626 131 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SNRPB2P08579 225 aaKnown RBP4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 DDX5P17844 614 aaKnown RBP4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 CXCR2P25025 360 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 ACTR1BP42025 376 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 KCNC1P48547 511 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 RAP1GDS1P52306 607 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 PNLIPRP1P54315 467 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SESN3P58005 492 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 ACTR1AP61163 376 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 KCNJ2P63252 427 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 DPTQ07507 201 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 NFYCQ13952 458 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 IRF4Q15306 451 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 PCBP2Q15366 365 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 CDKN3Q16667 212 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 AP5B1Q2VPB7 878 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 FBXW10Q5XX13 1052 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 NEK5Q6P3R8 708 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 CYB5D1Q6P9G0 228 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 ADAMTSL4Q6UY14 1074 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 MBOAT1Q6ZNC8 495 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SYVN1Q86TM6 617 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SPNS2Q8IVW8 549 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 SCUBE1Q8IWY4 988 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 PARP9Q8IXQ6 854 aa4.02□□□□□ -1.77
ATP13A3-206ENST00000461660 OR4F6Q8NGB9 312 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms