RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PDX1P52945 283 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 CD81P60033 236 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 RELQ04864 619 aaPredicted RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 RUNX1T1Q06455 604 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PNRC1Q12796 327 aaPredicted RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PTK6Q13882 451 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 DUOXA1Q1HG43 343 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 TYSND1Q2T9J0 566 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 KLHL26Q53HC5 615 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PDSS1Q5T2R2 415 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 IRAK1BP1Q5VVH5 260 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 FAM47EQ6ZV65 393 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 SPATA19Q7Z5L4 167 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PTOV1Q86YD1 416 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 DZIP1Q86YF9 867 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 CPSF7Q8N684 471 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 ATAD1Q8NBU5 361 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 Q8NFD4 153 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 SSMEM1Q8WWF3 244 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 SEMA4DQ92854 862 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 DAZLQ92904 295 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 DHX58Q96C10 678 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 MED30Q96HR3 178 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 IGSF21Q96ID5 467 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 CCDC114Q96M63 670 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 CAMK1GQ96NX5 476 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 OLFM1Q99784 485 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 DNAI2Q9GZS0 605 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 FN3KQ9H479 309 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 ST6GALNAC4Q9H4F1 302 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 C6orf106Q9H6K1 298 aaPredicted RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 GAREM1Q9H706 876 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 TBC1D17Q9HA65 648 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 XAB2Q9HCS7 855 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 TCF7L2Q9NQB0 619 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 ERAP1Q9NZ08 941 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 KLHL9Q9P2J3 617 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PDS5AQ29RF7 1337 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 EVPLQ92817 2033 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SAA2-SAA4A0A096LPE2 208 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PN81 502 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PPI3 338 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 PLSCR5A0PG75 271 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 HYKKA2RU49 373 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 NEMP2A6NFY4 417 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SRRM3A6NNA2 597 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ENO4A6NNW6 628 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 C4orf47A7E2U8 309 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF587BE7ETH6 402 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 MEIS2O14770 477 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SLC30A4O14863 429 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CLIC2O15247 247 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SPRY1O43609 319 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 DIAPH2O60879 1101 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 IGHV2-70P01814 119 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 C9P02748 559 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TFAP2AP05549 437 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 LIPFP07098 398 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 OR52Z1P0C646 297 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 HLA-DOBP13765 273 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 EPCAMP16422 314 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ITGA2P17301 1181 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ADRA2CP18825 462 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ACAT1P24752 427 aaKnown RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 PTPN3P26045 913 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 HOXA11P31270 313 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SOAT1P35610 550 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CHRNA7P36544 502 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CDKN2AP42771 156 aaKnown RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 THBS3P49746 956 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 DSCR9P59020 149 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CX3CL1P78423 397 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ZXDBP98169 803 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 POU3F1Q03052 451 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TUBB2AQ13885 445 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 KIR2DS3Q14952 304 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TAF13Q15543 124 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 MDH1BQ5I0G3 518 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CCNYL2Q5T2Q4 361 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 RUSC1-AS1Q66K80 236 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 NADSYN1Q6IA69 706 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 C11orf63Q6NUN7 778 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CAVIN1Q6NZI2 390 aaKnown RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 NOTUMQ6P988 496 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF449Q6P9G9 518 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SUSD1Q6UWL2 747 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TUBA1AQ71U36 451 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 MEPCEQ7L2J0 689 aaKnown RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 SPATA21Q7Z572 469 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 GLRX5Q86SX6 157 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 EXOC3L1Q86VI1 746 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 IQCA1Q86XH1 822 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ODF3L1Q8IXM7 274 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 FAM9BQ8IZU0 186 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 NAGSQ8N159 534 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 METTL27Q8N6F8 245 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 LILRB1Q8NHL6 650 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 GOT1L1Q8NHS2 421 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 AFAP1L1Q8TED9 768 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 MR1Q95460 341 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms