RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 RPL3P39023 403 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 FASLGP48023 281 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ALDH7A1P49419 539 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 ENTPD1P49961 510 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 GPC3P51654 580 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 SNU13P55769 128 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 POLR2LP62875 67 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 ARF5P84085 180 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TEFQ10587 303 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TROAPQ12815 778 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 PLA2G7Q13093 441 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 DAZAP2Q15038 168 aaPredicted RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 SLC39A14Q15043 492 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 LRRC73Q5JTD7 316 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TMPRSS11FQ6ZWK6 438 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ZNF367Q7RTV3 350 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TRAPPC11Q7Z392 1133 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 GPR180Q86V85 440 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 CLYBLQ8N0X4 340 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 GCSAMQ8N6F7 178 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 C7orf57Q8NEG2 295 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ANKRD20A12PQ8NF67 263 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ST7LQ8TDW4 575 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 STAMBPL1Q96FJ0 436 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 HMCESQ96FZ2 354 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 BSCL2Q96G97 398 aaPredicted RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 C16orf45Q96MC5 204 aaPredicted RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 SPATA33Q96N06 139 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ZNF582Q96NG8 517 aaPredicted RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 LRFN5Q96NI6 719 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TRIM7Q9C029 511 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 KRT23Q9C075 422 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ZNF350Q9GZX5 532 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 SEMA6AQ9H2E6 1030 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 FOXP1Q9H334 677 aaPredicted RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 MINDY3Q9H8M7 445 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 LIN28AQ9H9Z2 209 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 HHATLQ9HCP6 504 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 DNAJC17Q9NVM6 304 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 MCM9Q9NXL9 1143 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ELOVL5Q9NYP7 299 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 VPS18Q9P253 973 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 RCC2Q9P258 522 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 STK26Q9P289 416 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 IL19Q9UHD0 177 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 XPO7Q9UIA9 1087 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 LOXL2Q9Y4K0 774 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TRIM17Q9Y577 477 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 BICRAQ9NZM4 1560 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ACEP12821 1306 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 PTPN23Q9H3S7 1636 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 TONSLQ96HA7 1378 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ZMYM2Q9UBW7 1377 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 RNF103-CHMP3A0A140T963 221 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 A0A1W2PPQ1 181 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 hDV102S1A0JD36 115 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TMEM221A6NGB7 291 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PROB1E7EW31 1015 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RNF103O00237 685 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MPHOSPH10O00566 681 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 NDC80O14777 642 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 VEGFDO43915 354 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 SOX30O94993 753 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NDUFB8O95169 186 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PLA2G4BP0C869 781 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CD22P20273 847 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ASCL1P50553 236 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RASSF2P50749 326 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 LUMP51884 338 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 RABEP1Q15276 862 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 UGCGQ16739 394 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 KBTBD12Q3ZCT8 623 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TOR1AIP1Q5JTV8 583 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TCTE1Q5JU00 501 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 WASHC2DQ5SRD0 308 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 SLC27A1Q6PCB7 646 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 BRAT1Q6PJG6 821 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ENPP7Q6UWV6 458 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MRPL10Q7Z7H8 261 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 HDDC3Q8N4P3 179 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZNF611Q8N823 705 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PAPD5Q8NDF8 572 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZNF540Q8NDQ6 660 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 OR5R1Q8NH85 324 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 OIT3Q8WWZ8 545 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 LPAR1Q92633 364 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RAD54LQ92698 747 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CENPTQ96BT3 561 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MOB3AQ96BX8 217 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ISCUQ9H1K1 167 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ABCG8Q9H221 673 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 SLA2Q9H6Q3 261 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 FZD3Q9NPG1 666 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 KLHL1Q9NR64 748 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TRNAU1APQ9NX07 287 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 CNTLNQ9NXG0 1405 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NINJ2Q9NZG7 142 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TBC1D7Q9P0N9 293 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms