RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 METTL21CQ5VZV1 264 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 CLEC6AQ6EIG7 209 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 GPRIN3Q6ZVF9 776 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 CFAP61Q8NHU2 1237 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 FBXL8Q96CD0 374 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 HHIPQ96QV1 700 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 TBC1D17Q9HA65 648 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 MEAF6Q9HAF1 191 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 PRKAB1Q9Y478 270 aa23.85■■□□□ 1.41
U2AF1-204ENST00000459639 CCNT2O60583 730 aaKnown RBP23.84■■□□□ 1.41
U2AF1-204ENST00000459639 STK16O75716 305 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 CEACAM5P06731 702 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 CCR5P51681 352 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 SPRED3Q2MJR0 410 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 UGT3A2Q3SY77 523 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.84■■□□□ 1.41
U2AF1-204ENST00000459639 FAM83HQ6ZRV2 1179 aaPredicted RBP23.84■■□□□ 1.41
U2AF1-204ENST00000459639 LRRC70Q7Z2Q7 622 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 SYVN1Q86TM6 617 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 TEX9Q8N6V9 391 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 ZNHIT2Q9UHR6 403 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 CYP8B1Q9UNU6 501 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 SLC12A4Q9UP95 1085 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 ANGPTL3Q9Y5C1 460 aa23.84■■□□□ 1.41
U2AF1-204ENST00000459639 SDHDO14521 159 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 ZNF217O75362 1048 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 SKAP2O75563 359 aaPredicted RBP23.83■■□□□ 1.41
U2AF1-204ENST00000459639 DMPKQ09013 629 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 EFL1Q7Z2Z2 1120 aaKnown RBP23.83■■□□□ 1.41
U2AF1-204ENST00000459639 CCDC138Q96M89 665 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 OR52B2Q96RD2 323 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 TIMM29Q9BSF4 260 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 NUSAP1Q9BXS6 441 aaKnown RBP23.83■■□□□ 1.41
U2AF1-204ENST00000459639 OR52A5Q9H2C5 316 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 WDR55Q9H6Y2 383 aaPredicted RBP23.83■■□□□ 1.41
U2AF1-204ENST00000459639 NOL11Q9H8H0 719 aaKnown RBP23.83■■□□□ 1.41
U2AF1-204ENST00000459639 SLC23A2Q9UGH3 650 aa23.83■■□□□ 1.41
U2AF1-204ENST00000459639 POM121BA6NF01 834 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 OTCP00480 354 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 ACADLP28330 430 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 EPHA3P29320 983 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 AKT2P31751 481 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 BDKRB1P46663 353 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 SLC6A12P48065 614 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 CDC16Q13042 620 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 KIAA0895LQ68EN5 471 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 UNC5DQ6UXZ4 953 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 PDZD3Q86UT5 571 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 ATL1Q8WXF7 558 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 TOE1Q96GM8 510 aaKnown RBP23.83■■□□□ 1.4
U2AF1-204ENST00000459639 SCARF2Q96GP6 870 aaPredicted RBP23.83■■□□□ 1.4
U2AF1-204ENST00000459639 PRR11Q96HE9 360 aaPredicted RBP23.83■■□□□ 1.4
U2AF1-204ENST00000459639 CHRDQ9H2X0 955 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 SLC32A1Q9H598 525 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 IPPKQ9H8X2 491 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 ACTR5Q9H9F9 607 aaPredicted RBP23.83■■□□□ 1.4
U2AF1-204ENST00000459639 SAR1AQ9NR31 198 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 KLC4Q9NSK0 619 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 WSB2Q9NYS7 404 aaPredicted RBP23.83■■□□□ 1.4
U2AF1-204ENST00000459639 ZNF225Q9UK10 706 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 DNAJC15Q9Y5T4 150 aa23.83■■□□□ 1.4
U2AF1-204ENST00000459639 GOLGA8QA0A0J9YX86 632 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 A0A1B0GTL3 188 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 GOLGA8OA6NCC3 632 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 GOLGA8NF8WBI6 632 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 OR7A17O14581 309 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 CRCPO75575 148 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 C1orf105O95561 183 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 GDF5P43026 501 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 NFATC4Q14934 902 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 LSM12Q3MHD2 195 aaKnown RBP23.82■■□□□ 1.4
U2AF1-204ENST00000459639 METRNLQ641Q3 311 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 GALNT13Q8IUC8 556 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 CHCHD4Q8N4Q1 142 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 OR52B6Q8NGF0 335 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 CLDN23Q96B33 292 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 PPP1R36Q96LQ0 422 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 TRIM33Q9UPN9 1127 aa23.82■■□□□ 1.4
U2AF1-204ENST00000459639 TOR1BO14657 336 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 KCNJ13O60928 360 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 UROSP10746 265 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 EPB42P16452 691 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 KELP23276 732 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 PRDX3P30048 256 aaKnown RBP23.81■■□□□ 1.4
U2AF1-204ENST00000459639 CD6P30203 668 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 FOXA1P55317 472 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 CLDN2P57739 230 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 PFN3P60673 137 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 TRAF3Q13114 568 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 KRT72Q14CN4 511 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 TBCCQ15814 346 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 SPEM1Q8N4L4 309 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 PJA1Q8NG27 643 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 ACTRT2Q8TDY3 377 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 TWIST2Q8WVJ9 160 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 C6orf106Q9H6K1 298 aaPredicted RBP23.81■■□□□ 1.4
U2AF1-204ENST00000459639 TM7SF3Q9NS93 570 aa23.81■■□□□ 1.4
U2AF1-204ENST00000459639 KATNA1O75449 491 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 APBB3O95704 486 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 FUCA1P04066 466 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms